Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 CTAGE11P-201ENST00000451540 2353 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 QRSL1P1-201ENST00000400977 1540 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 MARK2P10-201ENST00000454959 1437 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF37BP-203ENST00000452306 1352 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AL354854.1-201ENST00000455940 1363 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 SNORD46-201ENST00000364043 104 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 Y_RNA.548-201ENST00000384656 105 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 YWHAZP6-201ENST00000399764 738 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RPS3AP3-201ENST00000411933 242 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 EEF1A1P40-201ENST00000412883 573 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL34P19-201ENST00000415903 342 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RAC1P4-201ENST00000419413 579 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL23AP34-201ENST00000423483 410 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 FABP7P1-201ENST00000424004 391 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL23AP4-201ENST00000427757 463 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC104850.1-201ENST00000435940 476 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 PCBP2P1-201ENST00000437262 977 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 UBE2V1P5-201ENST00000440070 405 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL18AP17-201ENST00000455326 198 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC109454.1-201ENST00000471205 498 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC099521.1-201ENST00000482557 334 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC018710.1-201ENST00000506509 158 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC117522.3-201ENST00000507974 584 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC105914.1-201ENST00000511798 226 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 MTND1P35-201ENST00000526739 508 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 NRBF2P5-201ENST00000603087 788 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC007363.1-201ENST00000604736 620 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090525.3-201ENST00000605601 189 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AL445264.1-201ENST00000621719 171 ntBASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHGA11Q9Y5H2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms