Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL161722.1-201ENST00000446972 1032 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 PPIAP20-201ENST00000449839 135 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LRRC37A14P-201ENST00000452297 462 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC090602.1-201ENST00000469695 252 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL101P-201ENST00000496350 279 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 SNORA43.3-201ENST00000517240 103 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC112191.2-201ENST00000522428 333 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC136777.2-201ENST00000522979 358 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 TRAV11-201ENST00000539512 339 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 MIR4302-201ENST00000638058 60 ntBASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4BQ9Y4P1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AL512422.1-201ENST00000407033 553 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RN7SKP286-201ENST00000410894 299 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RPL34P3-201ENST00000421454 338 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 REREP1Y-201ENST00000422655 198 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 CHEK2P5-201ENST00000423877 246 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 TPTE2P1-204ENST00000435256 593 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AL138787.1-202ENST00000437804 898 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 REREP2Y-201ENST00000439103 200 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AL596266.1-201ENST00000448132 400 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 OR6C72P-201ENST00000451403 892 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 SNORD125-201ENST00000459538 96 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL174P-201ENST00000475578 289 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RPS17P5-201ENST00000498293 408 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC020978.7-201ENST00000575953 1187 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RNA5SP440-201ENST00000612665 119 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AP000473.2-201ENST00000602659 1537 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 OR4F13P-202ENST00000560066 2054 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AC114774.1-201ENST00000507410 1770 ntBASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms