Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL049697.2-201ENST00000403708 294 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR8G2P-201ENST00000412796 908 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RPS12P31-201ENST00000491419 398 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RFPL4AP5-201ENST00000514977 504 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AP000619.3-201ENST00000535634 1127 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC010487.1-201ENST00000594408 1172 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 SNORA51-201ENST00000606420 132 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RAD17P1-201ENST00000418130 2042 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC130365.1-201ENST00000530524 1553 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 BX322650.1-201ENST00000332359 2143 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MRPL48P1-201ENST00000445390 636 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RPS27AP3-201ENST00000453803 454 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RNU6-237P-201ENST00000515985 71 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RN7SKP289-201ENST00000517244 295 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AP003080.1-202ENST00000526526 915 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AP000997.2-201ENST00000564619 8400 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 Z97832.1-201ENST00000402490 328 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL031121.1-201ENST00000406553 254 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MIR3945-201ENST00000581853 98 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC104447.1-201ENST00000624214 2124 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL121768.1-201ENST00000613917 2544 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ATG4AP1-201ENST00000416893 538 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC026826.1-201ENST00000493002 361 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC015795.1-201ENST00000513669 327 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 DPPA3P2-202ENST00000557188 1219 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AL513327.3-201ENST00000602618 469 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC020910.3-201ENST00000603701 874 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC011933.2-201ENST00000578539 2790 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC092111.2-201ENST00000611627 1414 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 SLC2A3P1-201ENST00000519666 1451 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ACA64.4-201ENST00000459070 127 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC007688.1-201ENST00000475592 759 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms