Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COPS3Q9UNS2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COPS3Q9UNS2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL359715.3-201ENST00000569267 2123 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 TMSB4XP2-201ENST00000335179 210 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RNA5SP30-201ENST00000365552 115 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RNA5SP487-201ENST00000410186 122 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL356968.2-201ENST00000412769 1257 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 NDUFS5P5-201ENST00000437256 321 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL596266.1-201ENST00000448132 400 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AZGP1P2-201ENST00000454506 345 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 SEPT7P3-201ENST00000455017 621 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 UBFD1P1-201ENST00000473259 814 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC122718.2-201ENST00000505325 591 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 HSD3BP3-201ENST00000514706 994 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 Vault.2-201ENST00000516519 98 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 PMS2P3-207ENST00000529061 717 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 TRIM51DP-201ENST00000529746 596 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC007956.1-201ENST00000555623 542 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL390726.5-202ENST00000564800 256 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 MIR4260-201ENST00000583107 67 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 OR55B1P-203ENST00000641518 2602 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC025574.1-201ENST00000554784 1653 ntBASIC4.96□□□□□ -1.62
COPS3Q9UNS2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 AC104966.1-201ENST00000467010 1464 ntBASIC4.95□□□□□ -1.62
COPS3Q9UNS2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPS3Q9UNS2 AC092681.1-201ENST00000297369 291 ntBASIC4.95□□□□□ -1.62
COPS3Q9UNS2 RNA5SP273-201ENST00000362484 113 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms