Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RNA5SP234-201ENST00000363916 119 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RNA5SP510-201ENST00000364697 99 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RN7SKP69-201ENST00000365390 305 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 SNORA5.1-201ENST00000384275 131 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 TRAV35-201ENST00000390462 330 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 SNORA48.4-201ENST00000391089 134 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 NPM1P37-201ENST00000403105 874 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RPS10P18-201ENST00000442662 495 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 RPL36AP39-201ENST00000445859 318 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 CBX1P2-201ENST00000453841 458 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC092754.1-201ENST00000472975 479 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC138409.2-202ENST00000507274 458 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 HMGB1P44-201ENST00000508597 572 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 IMPA1P1-201ENST00000510718 842 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC092709.1-201ENST00000521355 1045 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC027216.1-201ENST00000577726 685 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 MIR6778-201ENST00000617912 73 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AP003400.3-201ENST00000624904 346 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 AL353796.1-201ENST00000561542 3241 ntBASIC5.41□□□□□ -1.54
TREX1Q9NSU2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TREX1Q9NSU2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 CDY17P-201ENST00000414121 1282 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 HYALP1-201ENST00000417674 1279 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC124944.2-201ENST00000429866 1242 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 KCTD9P1-201ENST00000430462 1167 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AL390119.1-201ENST00000440329 312 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RPL5P25-201ENST00000441148 775 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AP000281.1-201ENST00000444036 316 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC073909.1-201ENST00000447112 999 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC105399.1-202ENST00000447303 205 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 OR52E7P-201ENST00000452394 933 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RPS27AP2-201ENST00000457576 465 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RPS12P31-201ENST00000491419 398 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RPL15P21-201ENST00000495592 567 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AP004607.2-201ENST00000533949 322 ntBASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.4□□□□□ -1.54
TREX1Q9NSU2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 AC079298.1-201ENST00000625026 1619 ntBASIC5.4□□□□□ -1.55
TREX1Q9NSU2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TREX1Q9NSU2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms