Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-362P-201ENST00000516736 90 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 BLZF2P-201ENST00000553776 1130 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC015720.2-201ENST00000567709 334 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 NDUFA5P11-201ENST00000567995 343 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 MIR3614-201ENST00000581261 86 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 FO393422.1-201ENST00000603908 708 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 MIR6839-201ENST00000620425 113 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OR8A1-204ENST00000642111 1145 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC079298.1-201ENST00000625026 1619 ntBASIC5.77□□□□□ -1.48
SIX2Q9NPC8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC093671.1-201ENST00000624981 2929 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 MIR621-201ENST00000384919 96 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AL031985.1-201ENST00000392713 418 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AL391422.1-201ENST00000402155 436 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 OR52E3P-201ENST00000452083 936 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 RN7SL273P-201ENST00000481561 299 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AP000926.3-201ENST00000497201 299 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC112191.2-201ENST00000522428 333 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC090286.3-201ENST00000573133 187 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 RBM22P1-201ENST00000578589 1214 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 MIR6778-201ENST00000617912 73 ntBASIC5.77□□□□□ -1.49
SIX2Q9NPC8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX2Q9NPC8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 RNA5SP335-201ENST00000363817 110 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 SNORA48.4-201ENST00000391089 134 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 MIR1282-201ENST00000408865 101 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 RPL12P9-201ENST00000412942 488 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 SDHDP6-201ENST00000414693 480 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 Z93019.1-201ENST00000416450 973 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 VN1R3-201ENST00000418822 919 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 RPL12P24-201ENST00000474907 486 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 RN7SL814P-201ENST00000487715 300 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC098976.1-201ENST00000513014 541 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 EIF3KP3-201ENST00000514461 639 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 RNA5SP373-201ENST00000517271 95 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC040958.1-201ENST00000561102 201 ntBASIC5.76□□□□□ -1.49
SIX2Q9NPC8 AC020978.7-201ENST00000575953 1187 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms