Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 FAM32BP-201ENST00000344033 333 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 CHEK2P3-201ENST00000416118 248 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AL139415.1-201ENST00000424862 352 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC073916.1-201ENST00000545095 130 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC099494.2-201ENST00000623371 978 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC011369.2-201ENST00000624423 1567 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC095057.1-201ENST00000507583 168 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC096754.1-201ENST00000508904 818 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 RPL23AP94-201ENST00000512518 302 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC022726.2-201ENST00000634673 547 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC022905.1-201ENST00000503430 3048 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC009948.5-201ENST00000624360 4406 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 DDX39BP1-205ENST00000422507 192 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC007161.1-204ENST00000423039 460 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 RPL12P28-201ENST00000430852 489 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 RPS3AP12-201ENST00000443616 753 ntBASIC5.1□□□□□ -1.59
CHD8Q9HCK8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD8Q9HCK8 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AC074141.1-201ENST00000588129 2995 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 GJA6P-201ENST00000415117 1042 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 GSTM5P1-201ENST00000434751 660 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AC109327.1-201ENST00000471666 403 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 DUTP1-201ENST00000493631 470 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 MIR2117-201ENST00000516780 80 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 TPM3P3-201ENST00000521343 354 ntBASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
CHD8Q9HCK8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 UGT2B25P-201ENST00000511504 1586 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms