Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MIR130B-202ENST00000385018 82 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL096711.1-201ENST00000404780 554 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 BX119321.1-201ENST00000428912 797 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC098847.1-201ENST00000473094 348 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC099521.1-201ENST00000482557 334 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 RPL9P15-201ENST00000491096 532 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 PSG10P-201ENST00000501199 1500 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 SNORA76.2-201ENST00000517095 137 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 OSBPL9P3-201ENST00000534523 595 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL512310.9-201ENST00000553311 948 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL358913.1-201ENST00000554342 121 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC091078.2-201ENST00000557145 559 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC093510.2-201ENST00000562820 896 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 MIR3154-201ENST00000577829 84 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 MIR6809-201ENST00000612189 116 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AC079298.1-201ENST00000625026 1619 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 AL355488.2-201ENST00000609909 2850 ntBASIC5.61□□□□□ -1.51
BRF2Q9HAW0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRF2Q9HAW0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC104966.1-201ENST00000467010 1464 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC117409.1-201ENST00000470499 1310 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AL136131.1-201ENST00000406079 803 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 RNGTTP1-201ENST00000420965 728 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 DEFA9P-201ENST00000433042 285 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 PPIAP27-201ENST00000453800 265 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 RPL12P39-201ENST00000455456 496 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC004129.2-201ENST00000457229 287 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AL157777.1-201ENST00000468100 304 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC108729.2-201ENST00000476543 840 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC021006.1-201ENST00000489849 553 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC073610.1-201ENST00000489971 396 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 RPL23AP73-201ENST00000492507 471 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 GAPDHP71-201ENST00000511530 1003 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC092451.2-201ENST00000538746 658 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC009237.12-201ENST00000604755 742 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 BNIP3P19-201ENST00000605397 577 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AP006248.3-201ENST00000623580 594 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AP001052.1-201ENST00000626421 99 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AP001284.1-201ENST00000528393 2118 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms