Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DUXAP11-201ENST00000603858 526 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AL163642.2-201ENST00000604722 1019 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AC005377.1-201ENST00000605126 456 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AC072039.2-201ENST00000608883 439 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AP003789.1-201ENST00000617737 605 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AL596275.2-207ENST00000641188 675 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AC006213.6-201ENST00000623722 4179 ntBASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXP3Q9BZS1 AC068769.1-201ENST00000474767 2426 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AL451142.1-201ENST00000375867 775 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 SNORA70.9-201ENST00000384370 135 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RN7SKP296-201ENST00000411185 341 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 VN1R31P-201ENST00000417498 730 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 CYCSP42-201ENST00000450823 238 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RN7SL492P-201ENST00000460700 295 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 UOX-201ENST00000471089 899 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 BZW1P2-201ENST00000473537 826 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC020937.1-201ENST00000519677 1013 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 MTCYBP41-201ENST00000528913 1123 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC095057.3-201ENST00000567102 1157 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NDUFA5P11-201ENST00000567995 343 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AP001269.3-201ENST00000588718 329 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AP002906.1-201ENST00000603405 233 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 RN7SKP299-201ENST00000606679 301 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC015540.1-201ENST00000615828 501 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AL121936.2-201ENST00000641935 662 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC092104.1-201ENST00000497346 1441 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AC095038.1-201ENST00000429248 1591 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 AL049634.1-201ENST00000453770 1720 ntBASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXP3Q9BZS1 NCOA4P2-201ENST00000340589 1813 ntBASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 RNA5SP152-201ENST00000365184 110 ntBASIC6.8□□□□□ -1.32
FOXP3Q9BZS1 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms