Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 H3F3BP2-201ENST00000583907 357 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 HSPD1P8-201ENST00000400121 1658 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 AC132825.1-201ENST00000463573 2247 ntBASIC8.16□□□□□ -1.1
SCAPERQ9BY12 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCAPERQ9BY12 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 Z95114.1-201ENST00000624264 14574 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AC096921.1-201ENST00000411661 375 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 CRIP1P1-201ENST00000427567 185 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 RN7SL481P-201ENST00000477764 299 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 PDCL3P4-201ENST00000489621 720 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 YWHABP2-201ENST00000540201 713 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AC008033.2-201ENST00000542626 177 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 EIF3FP1-201ENST00000613970 806 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 AC007114.2-201ENST00000576014 4281 ntBASIC8.15□□□□□ -1.1
SCAPERQ9BY12 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCAPERQ9BY12 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SCAPERQ9BY12 IRF5P1-201ENST00000504852 2164 ntBASIC8.15□□□□□ -1.11
SCAPERQ9BY12 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SCAPERQ9BY12 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 RNF10P1-201ENST00000418589 369 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 EI24P4-201ENST00000423683 1078 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 TMEM183AP1-205ENST00000432739 290 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC073410.1-201ENST00000435125 589 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC021006.3-201ENST00000530771 192 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AL161616.1-201ENST00000611867 286 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC073575.2-201ENST00000614212 627 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 OR9K1P-202ENST00000641111 3217 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 AC005225.5-201ENST00000623547 2225 ntBASIC8.14□□□□□ -1.11
SCAPERQ9BY12 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCAPERQ9BY12 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 RNA5SP505-201ENST00000364748 108 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 RPS21P8-201ENST00000413365 247 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 GJA6P-201ENST00000415117 1042 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AL133482.1-201ENST00000415988 498 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 RPL12P17-201ENST00000432393 498 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 EDDM3DP-201ENST00000554692 434 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 MIR4737-201ENST00000583979 81 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AL031320.1-201ENST00000604177 357 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AL352984.2-202ENST00000613699 155 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AC083809.1-201ENST00000615051 472 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AP003789.1-201ENST00000617737 605 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms