Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC004817.2-201ENST00000561794 651 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC022916.3-201ENST00000592961 742 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 OR7A8P-201ENST00000595427 913 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 NRBF2P5-201ENST00000603087 788 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AL161729.4-201ENST00000604650 476 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 MEMO1P5-201ENST00000604810 406 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC136475.10-201ENST00000620253 385 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC010332.1-201ENST00000620439 97 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AL049767.1-202ENST00000637826 242 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC090983.1-201ENST00000623426 3897 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 RNA5SP77-201ENST00000365394 120 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MIR188-201ENST00000385034 86 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MIR559-201ENST00000385188 96 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MIR152-201ENST00000385212 87 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 RPS27AP11-201ENST00000402798 447 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 XKRYP4-201ENST00000414395 483 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 RPS7P15-201ENST00000415804 584 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AIMP1P1-201ENST00000418670 937 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 EEF1GP7-201ENST00000422983 703 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL358176.2-201ENST00000425769 204 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MTND6P12-201ENST00000428247 522 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL645939.3-201ENST00000435408 225 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL627224.1-201ENST00000448334 444 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 XKRYP5-201ENST00000449659 483 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL031736.1-201ENST00000449688 618 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC079776.3-201ENST00000450665 370 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC105029.1-201ENST00000520250 669 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC004825.1-201ENST00000555068 586 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC019322.1-201ENST00000571869 389 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC100830.2-201ENST00000581636 240 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 UBE2L4-201ENST00000587688 464 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC020916.2-201ENST00000591242 360 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC011447.2-201ENST00000592921 283 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL592494.3-201ENST00000609485 464 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 HMGB1P24-202ENST00000615653 685 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AC243756.2-201ENST00000618406 463 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 AL158801.5-201ENST00000623123 465 ntBASIC7.37□□□□□ -1.23
COL25A1Q9BXS0 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms