Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 IGBP1P1-201ENST00000554337 1009 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC026826.3-201ENST00000561747 158 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 MIR3154-201ENST00000577829 84 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC012616.1-201ENST00000600294 197 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC129778.1-202ENST00000623812 261 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 MTCO1P1-201ENST00000624263 1081 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AL591379.1-207ENST00000635982 261 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AL360270.2-201ENST00000562952 5985 ntBASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.95□□□□□ -1.46
BPIFA3Q9BQP9 AC025574.1-201ENST00000554784 1653 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC017079.1-201ENST00000333650 415 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 MIR375-201ENST00000362103 64 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 RNA5SP232-201ENST00000364144 119 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 HMGB1P20-201ENST00000402555 677 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 RPL10P10-201ENST00000403509 664 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AL450996.1-201ENST00000445574 1202 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 BX842559.2-201ENST00000451418 605 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC079168.1-201ENST00000458741 345 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 NIFKP7-201ENST00000503365 834 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC114781.3-201ENST00000512083 142 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 RNU6-1334P-201ENST00000516032 105 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 OR8A2P-201ENST00000528631 952 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC068305.2-201ENST00000550567 1205 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 MRPS21P7-201ENST00000566937 238 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC005479.3-201ENST00000602790 431 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AC011626.1-201ENST00000604710 562 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 BX005214.3-202ENST00000619809 325 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 MRRFP1-201ENST00000435941 1675 ntBASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.94□□□□□ -1.46
BPIFA3Q9BQP9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 RN7SKP171-201ENST00000364417 303 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 MIR1275-201ENST00000408770 80 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 REREP1Y-201ENST00000422655 198 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 SETP9-201ENST00000423837 832 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 RPL12P18-201ENST00000437175 325 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 REREP2Y-201ENST00000439103 200 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 GTF3AP5-201ENST00000442645 697 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 RN7SL273P-201ENST00000481561 299 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 HMGB1P44-201ENST00000508597 572 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 NPM1P21-201ENST00000513394 762 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 CCDC58P1-201ENST00000578567 430 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AC006363.1-201ENST00000603806 463 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL162431.4-201ENST00000604674 411 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL118522.2-201ENST00000616045 615 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AP000648.2-201ENST00000624182 404 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AP001052.1-201ENST00000626421 99 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AC004817.4-201ENST00000602396 3625 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 NEPNP-201ENST00000404786 1371 ntBASIC5.93□□□□□ -1.46
BPIFA3Q9BQP9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BPIFA3Q9BQP9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms