Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC009948.3-201ENST00000603415 1798 ntBASIC7□□□□□ -1.29
ABCA3Q99758 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
ABCA3Q99758 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7□□□□□ -1.29
ABCA3Q99758 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7□□□□□ -1.29
ABCA3Q99758 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7□□□□□ -1.29
ABCA3Q99758 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7□□□□□ -1.29
ABCA3Q99758 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 RNA5SP90-201ENST00000364801 99 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.99□□□□□ -1.29
ABCA3Q99758 RPS17P17-201ENST00000419392 409 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 CRIP1P1-201ENST00000427567 185 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 AC007559.1-201ENST00000428736 355 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.99□□□□□ -1.29
ABCA3Q99758 AC019193.2-201ENST00000610012 634 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 AC005725.1-201ENST00000577346 2607 ntBASIC6.99□□□□□ -1.29
ABCA3Q99758 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ABCA3Q99758 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.99□□□□□ -1.29
ABCA3Q99758 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.99□□□□□ -1.29
ABCA3Q99758 BX323845.1-201ENST00000432417 179 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AL359265.2-201ENST00000434367 631 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AC012512.1-201ENST00000446594 718 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AC079168.1-201ENST00000458741 345 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AC006967.1-201ENST00000467608 589 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 RN7SKP122-201ENST00000515923 296 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 RN7SKP260-201ENST00000516907 149 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.98□□□□□ -1.29
ABCA3Q99758 BGLT3-201ENST00000564523 994 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 AC244107.2-201ENST00000611773 76 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.98□□□□□ -1.29
ABCA3Q99758 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ABCA3Q99758 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 NUDT19P3-201ENST00000404698 555 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 ELOCP19-201ENST00000411919 318 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 RPS27AP7-201ENST00000422792 455 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 HMGN2P25-201ENST00000486956 268 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.98□□□□□ -1.29
ABCA3Q99758 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.98□□□□□ -1.29
ABCA3Q99758 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.98□□□□□ -1.29
ABCA3Q99758 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.98□□□□□ -1.29
ABCA3Q99758 AL034374.2-201ENST00000605281 548 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 OR52H1-202ENST00000641796 1061 ntBASIC6.98□□□□□ -1.29
ABCA3Q99758 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ABCA3Q99758 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.97□□□□□ -1.29
ABCA3Q99758 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.97□□□□□ -1.29
ABCA3Q99758 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ABCA3Q99758 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 AC010928.1-201ENST00000592477 1447 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 AL354868.1-201ENST00000417077 482 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 AC012519.1-201ENST00000424588 610 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.97□□□□□ -1.29
ABCA3Q99758 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.97□□□□□ -1.29
ABCA3Q99758 KRT8P51-201ENST00000438938 274 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.97□□□□□ -1.29
ABCA3Q99758 RPL17P2-201ENST00000491913 451 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 GLUD1P3-202ENST00000508551 200 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 AC096754.1-201ENST00000508904 818 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 AC026402.1-201ENST00000513642 170 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 OR4A17P-201ENST00000526032 904 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms