Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC027559.1-201ENST00000636288 271 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AC073429.2-201ENST00000569694 1444 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 Z93929.1-201ENST00000418200 1475 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 AP005139.1-201ENST00000580702 1647 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 CUBNP3-201ENST00000457461 1784 ntBASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCHD1Q96NR3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC122713.2-201ENST00000624942 3335 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RNA5SP65-201ENST00000363166 119 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RNU6-560P-201ENST00000364007 108 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC092634.1-201ENST00000366505 199 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RNU6-1200P-201ENST00000384162 107 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RNU2-16P-201ENST00000410712 136 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RNU6-920P-201ENST00000410926 92 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RN7SKP205-201ENST00000410999 307 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 FCF1P9-201ENST00000412546 282 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 PTPN2P1-201ENST00000423212 1072 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR5AW1P-201ENST00000426334 1006 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC009784.1-201ENST00000426484 460 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC083855.1-201ENST00000440041 258 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 MTATP6P23-201ENST00000440153 476 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 HMGN1P32-201ENST00000441744 256 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL353572.1-201ENST00000442490 417 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 SNRPBP1-201ENST00000443634 282 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 WDR82P2-201ENST00000444540 928 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR52E3P-201ENST00000452083 936 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RPS4XP17-201ENST00000479057 754 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RPL23AP80-201ENST00000495605 424 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC009567.2-201ENST00000502989 349 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC106800.2-201ENST00000514009 1103 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC113191.1-201ENST00000517759 403 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC087752.2-201ENST00000521219 281 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR5G4P-201ENST00000525251 760 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR9L1P-201ENST00000529493 933 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC140063.1-201ENST00000541343 259 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 OR5BK1P-201ENST00000550421 823 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 ATP5F1P7-201ENST00000567330 760 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC074051.3-201ENST00000570238 358 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC027796.1-201ENST00000575593 512 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC079089.3-201ENST00000603094 673 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RPS4XP21-201ENST00000603814 750 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AL513477.2-201ENST00000607858 568 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC025588.4-201ENST00000615802 908 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AP004607.9-201ENST00000618202 316 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC022509.4-201ENST00000621404 572 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC025287.2-201ENST00000621911 668 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC008443.7-201ENST00000622195 246 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 AC022507.1-201ENST00000548349 1505 ntBASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms