Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC092349.1-201ENST00000504903 310 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AC138517.1-201ENST00000515724 568 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.82□□□□□ -1.32
ERCC4Q92889 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.82□□□□□ -1.32
ERCC4Q92889 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC013444.2-201ENST00000603317 787 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 RPSAP75-201ENST00000605848 301 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AC106052.1-201ENST00000608029 497 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AC078880.5-201ENST00000617845 421 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 RNU6-298P-201ENST00000390888 96 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AL121977.1-201ENST00000401636 979 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 RN7SKP17-201ENST00000411242 351 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.81□□□□□ -1.32
ERCC4Q92889 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AL590399.2-201ENST00000427536 309 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC006994.1-201ENST00000438212 839 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC245517.2-201ENST00000442890 346 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AL031313.1-201ENST00000448435 256 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 RPL7P61-201ENST00000451721 751 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 ACA64.4-201ENST00000459070 127 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 RN7SL352P-201ENST00000466002 277 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 STRADBP1-201ENST00000478954 1281 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AC008427.1-201ENST00000503102 655 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AK4P6-201ENST00000505168 528 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.81□□□□□ -1.32
ERCC4Q92889 UBTFL10-201ENST00000528532 562 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC124283.4-201ENST00000581815 456 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AL160237.3-201ENST00000604114 1013 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 AP002791.1-201ENST00000623291 381 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.81□□□□□ -1.32
ERCC4Q92889 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ERCC4Q92889 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
ERCC4Q92889 AL355834.1-201ENST00000556602 3965 ntBASIC6.81□□□□□ -1.32
ERCC4Q92889 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ERCC4Q92889 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC016583.1-201ENST00000624221 2431 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ERCC4Q92889 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ERCC4Q92889 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms