Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC079922.1-201ENST00000443291 359 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC044797.1-201ENST00000445744 679 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 GAPDHP25-201ENST00000447061 1001 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 NPM1P42-201ENST00000560329 862 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MIR3667-201ENST00000581025 74 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MIR4429-201ENST00000580105 73 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC009237.13-201ENST00000603193 276 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ITPK1-AS1-201ENST00000553639 4701 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC068870.1-201ENST00000563737 2455 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC013268.3-201ENST00000262716 2324 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC068287.1-201ENST00000430283 295 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 COX6B1P5-201ENST00000509843 249 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 RNA5SP43-201ENST00000516559 110 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MIR4284-201ENST00000578924 81 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 RN7SL356P-201ENST00000582228 248 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MEMO1P5-201ENST00000604810 406 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MIR134-201ENST00000385258 73 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AL009179.1-201ENST00000406085 265 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RPL12P39-201ENST00000455456 496 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 TRBV5-2-201ENST00000489095 273 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MORF4L1P3-201ENST00000525966 950 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC091932.2-201ENST00000623014 291 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC016717.3-201ENST00000624730 554 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC099654.6-201ENST00000636487 512 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AP004607.3-201ENST00000530354 3915 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC016745.2-201ENST00000608834 3443 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AL450345.1-202ENST00000605741 3881 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms