Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RANP1-206ENST00000455094 651 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 PSMC1P13-201ENST00000458195 985 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 SNORA81.1-201ENST00000458922 177 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC091982.1-202ENST00000473923 343 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 RPL7P16-201ENST00000479738 738 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 RPL23AP8-201ENST00000479812 475 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AF305872.1-201ENST00000485217 471 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC122714.1-201ENST00000502510 459 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC105391.1-201ENST00000503155 1045 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 RNU6-720P-201ENST00000516363 108 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC107952.1-201ENST00000524200 376 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AP000873.5-201ENST00000533906 236 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 PDCL3P1-201ENST00000534575 734 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 RN7SL131P-201ENST00000579043 256 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC125494.2-201ENST00000602431 657 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC067773.1-201ENST00000603284 1094 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 WBP1LP12-201ENST00000604449 331 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AL592221.1-201ENST00000605266 382 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC099842.1-201ENST00000619919 596 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC009878.1-201ENST00000621819 340 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC119674.1-212ENST00000641155 993 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AL442128.2-201ENST00000620246 1824 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 AC012078.1-201ENST00000405035 1646 ntBASIC6.94□□□□□ -1.3
PHC3Q8NDX5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PHC3Q8NDX5 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AL391261.1-201ENST00000555712 1479 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 RN7SKP257-201ENST00000364525 309 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC074375.1-201ENST00000372993 192 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AL451142.1-201ENST00000375867 775 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 MIR431-201ENST00000385266 114 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 RNA5SP498-201ENST00000411342 120 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC092745.2-202ENST00000411880 369 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 VDAC1P10-201ENST00000416715 891 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AL049610.1-201ENST00000423374 372 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 MTCO1P52-201ENST00000433928 531 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 HMGB1P16-201ENST00000447155 540 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC079776.3-201ENST00000450665 370 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 RN7SL160P-201ENST00000468558 284 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AL591122.1-201ENST00000487348 492 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 CCDC11P1-201ENST00000503137 1162 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC073648.3-201ENST00000504939 925 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 LTV1P1-201ENST00000510683 1237 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 RNA5SP75-201ENST00000516841 111 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 SCARNA18.2-201ENST00000516882 84 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC109635.6-201ENST00000525487 1113 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AP001284.1-201ENST00000528393 2118 ntBASIC6.93□□□□□ -1.3
PHC3Q8NDX5 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.93□□□□□ -1.3
PHC3Q8NDX5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms