Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AP000797.2-201ENST00000475768 606 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 SNRPCP2-201ENST00000504370 475 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 MIR3691-201ENST00000578066 90 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 RPSAP73-201ENST00000614820 330 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 MIR7155-201ENST00000615925 56 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 SNURFL-201ENST00000309296 343 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 MIR937-201ENST00000401271 86 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 AC007394.1-201ENST00000421941 531 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 NPM1P18-201ENST00000434232 732 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 RHOT1P3-201ENST00000436571 331 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 REG1CP-206ENST00000447469 496 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 AC111000.6-201ENST00000514471 709 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 RN7SL708P-201ENST00000580952 299 ntBASIC8.28□□□□□ -1.08
VPS8Q8N3P4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.28□□□□□ -1.08
VPS8Q8N3P4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
VPS8Q8N3P4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 MIR1182-201ENST00000408363 97 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 DDX39BP1-205ENST00000422507 192 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 RN7SL808P-201ENST00000496066 299 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 GTF2F2P1-201ENST00000511083 675 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AC110775.1-201ENST00000513721 462 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 IGLV2-28-201ENST00000520681 304 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AC006116.3-201ENST00000592968 361 ntBASIC8.27□□□□□ -1.09
VPS8Q8N3P4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
VPS8Q8N3P4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RNU1-74P-201ENST00000384108 171 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RPL23AP27-201ENST00000415161 451 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RPL7AP49-201ENST00000429522 581 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AL591438.1-201ENST00000433508 581 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 CLUHP1-201ENST00000435012 1190 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC092647.2-201ENST00000452998 253 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC093270.2-201ENST00000486157 792 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 RPSAP51-201ENST00000497462 645 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC097173.1-201ENST00000505862 819 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 HMGN2P6-201ENST00000551091 273 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC011626.1-201ENST00000604710 562 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AL121612.2-201ENST00000612261 482 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms