Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PYHIN5P-201ENST00000431627 723 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 CICP10-201ENST00000439497 198 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC002366.1-201ENST00000446186 1190 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 TRGVB-201ENST00000453257 471 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RPL7P6-201ENST00000480903 738 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC005017.1-201ENST00000482002 490 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RN7SL65P-201ENST00000485221 315 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MYADML-203ENST00000491596 951 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC012170.1-201ENST00000495139 359 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC105914.1-201ENST00000511798 226 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC006499.2-201ENST00000513470 337 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC106800.2-201ENST00000514009 1103 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LRRC34P2-201ENST00000514850 553 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 SCARNA6.1-201ENST00000516989 238 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AP003467.2-201ENST00000520175 319 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC008562.1-201ENST00000521763 330 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AF235103.2-201ENST00000525753 346 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AP006587.2-201ENST00000530696 493 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC025252.2-201ENST00000537470 502 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC123904.3-201ENST00000547218 814 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 CENPUP2-201ENST00000555897 1186 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MIR4307-201ENST00000582802 84 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 SNRPCP20-201ENST00000588011 210 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 BNIP3P23-201ENST00000599655 511 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC104117.5-201ENST00000606195 547 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RN7SL760P-201ENST00000607344 270 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MIR8089-201ENST00000620165 82 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 PISRT1-201ENST00000626175 531 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC091544.5-201ENST00000620192 3815 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 AC110716.2-201ENST00000563865 3945 ntBASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
DEPDC4Q8N2C3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 THAP12P7-201ENST00000520248 2290 ntBASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
DEPDC4Q8N2C3 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 UGT2B27P-201ENST00000505092 1620 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 SNORA70I-201ENST00000384544 135 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 MIR654-201ENST00000385199 81 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC104297.1-201ENST00000393779 870 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RN7SKP168-201ENST00000410910 300 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RNU6-272P-201ENST00000411028 104 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 GAPDHP69-201ENST00000425504 1008 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC073069.1-201ENST00000428657 441 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 Z98752.2-201ENST00000432727 312 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AL445686.1-201ENST00000443086 348 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC090954.1-201ENST00000445502 361 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RPS20P24-201ENST00000457473 361 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RPS4XP17-201ENST00000479057 754 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC018695.1-201ENST00000484096 664 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC106872.3-201ENST00000495104 446 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL792P-201ENST00000496286 305 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC114964.1-201ENST00000502306 1111 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC025674.1-201ENST00000507074 324 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 TPM3P3-201ENST00000521343 354 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms