Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC111000.6-201ENST00000514471 709 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC078878.1-201ENST00000539832 958 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AL049779.3-201ENST00000557141 606 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC011270.1-201ENST00000558606 583 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC090607.5-201ENST00000615692 224 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC126175.1-201ENST00000617041 758 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC103703.1-201ENST00000634783 663 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 AC117409.1-201ENST00000470499 1310 ntBASIC5.22□□□□□ -1.57
CHMP1BQ7LBR1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 AP001029.2-203ENST00000589795 4910 ntBASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 AC130304.1-201ENST00000622942 2385 ntBASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.21□□□□□ -1.57
CHMP1BQ7LBR1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 OR5T3-201ENST00000303059 1023 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RNU1-150P-201ENST00000362491 162 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RNU4-23P-201ENST00000362839 140 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RMRPP5-201ENST00000411156 267 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RANP7-201ENST00000418085 644 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC064862.4-201ENST00000442180 334 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 PPIAP20-201ENST00000449839 135 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC018638.3-201ENST00000461273 132 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC074255.1-201ENST00000511259 501 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 snoU109.5-201ENST00000516231 132 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 TMEM97P2-201ENST00000517841 403 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC093591.2-201ENST00000565254 3843 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC009852.2-201ENST00000567898 485 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC012146.2-201ENST00000576545 416 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AL022394.1-201ENST00000606979 292 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RN7SL544P-201ENST00000617232 284 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RN7SL763P-201ENST00000620922 284 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 AC079776.5-201ENST00000641920 211 ntBASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP1BQ7LBR1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms