Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 MAPK10-338ENST00000641647 3362 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 RNF10P1-201ENST00000418589 369 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 BX276092.6-201ENST00000430476 250 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 NPM1P48-201ENST00000436002 853 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 VDAC2P4-201ENST00000452925 711 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 MEMO1P4-201ENST00000453590 386 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 BX276092.8-201ENST00000455722 250 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC100832.1-201ENST00000471945 383 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 RN7SL547P-201ENST00000490793 290 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 IGLV3-24-201ENST00000517477 197 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 SUMO2P15-201ENST00000604285 278 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AL133481.2-203ENST00000607558 139 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 AL035661.1-201ENST00000620459 1144 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 MIR8080-201ENST00000622224 89 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 MAPK10-350ENST00000641777 965 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3CQ6NXT2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC125336.1-201ENST00000508893 2827 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC005005.4-201ENST00000623789 16698 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC020633.1-201ENST00000468439 2247 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RNA5SP234-201ENST00000363916 119 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RN7SKP28-201ENST00000364770 305 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RNU4-2-201ENST00000365668 141 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 SNORA5.1-201ENST00000384275 131 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RNA5SP91-201ENST00000390902 119 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 BMS1P13-201ENST00000417301 885 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC234781.4-201ENST00000419384 244 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 CFL1P1-202ENST00000432948 411 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 USP24P1-201ENST00000433802 779 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AL163193.1-201ENST00000444895 788 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 NPM1P19-201ENST00000450070 712 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RANP1-206ENST00000455094 651 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC007386.1-201ENST00000455212 582 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC026348.1-201ENST00000462549 1053 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC090638.1-201ENST00000498296 909 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 KCTD9P6-201ENST00000522306 950 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms