Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC017019.1-201ENST00000426129 261 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 VDAC1P6-201ENST00000430062 855 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 HMGN1P36-201ENST00000446623 298 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AP002345.1-201ENST00000456493 928 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC022336.1-201ENST00000475510 337 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 HMGB1P47-201ENST00000511281 589 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 RPS27AP18-201ENST00000515536 459 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 CDH12P4-201ENST00000517835 295 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 CDH12P3-201ENST00000517935 295 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 CDH12P1-201ENST00000518435 295 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 OR10D4P-201ENST00000525892 951 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC008147.3-201ENST00000548666 354 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC073046.2-201ENST00000604756 527 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC005014.3-201ENST00000605985 190 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SNORA74.4-201ENST00000607595 199 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AP000864.1-201ENST00000609424 650 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 MIR6811-201ENST00000620409 58 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SAMMSON-213ENST00000641336 1521 ntBASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM3Q53GG5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM3Q53GG5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM3Q53GG5 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC019072.1-201ENST00000604535 1551 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 MIR365B-201ENST00000362317 111 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 RNU1-84P-201ENST00000365447 164 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 DNAJA1P3-201ENST00000399417 1194 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 SPTLC1P2-201ENST00000407089 121 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 UBE2V1P15-201ENST00000407776 448 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AL357078.2-201ENST00000416486 427 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 MTCO1P45-201ENST00000431457 267 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 RPL17P35-201ENST00000432217 549 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AL731534.1-201ENST00000434711 269 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM3Q53GG5 RANP2-201ENST00000456833 229 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 ACA64.1-201ENST00000459171 127 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC105918.1-201ENST00000474399 838 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 RN7SL799P-201ENST00000475891 298 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 RPL7AP10-201ENST00000481016 791 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC090543.1-201ENST00000492168 485 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 TMEM97P2-201ENST00000517841 403 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC244502.2-201ENST00000543361 851 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC018552.1-201ENST00000562099 811 ntBASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM3Q53GG5 AC010487.1-201ENST00000594408 1172 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms