Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RFX7Q2KHR2 AC073429.2-201ENST00000569694 1444 ntBASIC6.6□□□□□ -1.35
RFX7Q2KHR2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC005294.1-201ENST00000355509 281 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 RNA5SP507-201ENST00000363603 121 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AL645927.1-201ENST00000396783 406 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 MTND2P40-201ENST00000436718 841 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 OTX2P1-201ENST00000450956 354 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC072052.1-201ENST00000496556 306 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 HMGB1P44-201ENST00000508597 572 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC079064.1-201ENST00000528365 362 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 uc_338.7-201ENST00000621834 124 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 AC006600.2-201ENST00000624834 2506 ntBASIC6.59□□□□□ -1.35
RFX7Q2KHR2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX7Q2KHR2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.59□□□□□ -1.36
RFX7Q2KHR2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.59□□□□□ -1.36
RFX7Q2KHR2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 RPL23AP27-201ENST00000415161 451 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AL133482.1-201ENST00000415988 498 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 RPS27AP6-201ENST00000427962 448 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AURKAPS1-201ENST00000451805 1212 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 RN7SL447P-201ENST00000494711 245 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 RN7SL808P-201ENST00000496066 299 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 SCARNA20.4-201ENST00000516969 131 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 OR11J2P-201ENST00000555298 907 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 MIR4700-201ENST00000578311 74 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 TAS2R6P-201ENST00000605022 826 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC126915.2-201ENST00000610957 190 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC090527.3-201ENST00000619041 548 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 AC093297.3-201ENST00000607056 2517 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 ZNF402P-201ENST00000404435 3100 ntBASIC6.58□□□□□ -1.36
RFX7Q2KHR2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX7Q2KHR2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 RNA5SP514-201ENST00000363717 111 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SNORA70.6-201ENST00000383934 134 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 MIR223-201ENST00000385204 110 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SRSF1P1-201ENST00000424058 520 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 DSTNP5-201ENST00000427921 523 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC105399.1-202ENST00000447303 205 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC009963.4-201ENST00000448535 339 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AP000797.2-201ENST00000475768 606 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 RPS24P16-201ENST00000497294 392 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms