Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.06□□□□□ -1.44
TPM4P67936 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 RNA5SP279-201ENST00000365513 117 ntBASIC6.06□□□□□ -1.44
TPM4P67936 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TPM4P67936 MIR191-201ENST00000384873 92 ntBASIC6.06□□□□□ -1.44
TPM4P67936 RMRPP5-201ENST00000411156 267 ntBASIC6.06□□□□□ -1.44
TPM4P67936 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 RN7SL273P-201ENST00000481561 299 ntBASIC6.06□□□□□ -1.44
TPM4P67936 NENFP3-201ENST00000503735 313 ntBASIC6.06□□□□□ -1.44
TPM4P67936 AC109464.1-201ENST00000511091 819 ntBASIC6.06□□□□□ -1.44
TPM4P67936 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.06□□□□□ -1.44
TPM4P67936 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.06□□□□□ -1.44
TPM4P67936 AC130364.2-201ENST00000528639 604 ntBASIC6.06□□□□□ -1.44
TPM4P67936 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM4P67936 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.06□□□□□ -1.44
TPM4P67936 AC124916.2-201ENST00000604416 224 ntBASIC6.06□□□□□ -1.44
TPM4P67936 AC022001.1-201ENST00000605193 268 ntBASIC6.06□□□□□ -1.44
TPM4P67936 AC244107.2-201ENST00000611773 76 ntBASIC6.06□□□□□ -1.44
TPM4P67936 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
TPM4P67936 AC025574.2-201ENST00000615621 514 ntBASIC6.06□□□□□ -1.44
TPM4P67936 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TPM4P67936 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TPM4P67936 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.06□□□□□ -1.44
TPM4P67936 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM4P67936 AL162456.1-201ENST00000634535 2006 ntBASIC6.06□□□□□ -1.44
TPM4P67936 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.06□□□□□ -1.44
TPM4P67936 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM4P67936 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TPM4P67936 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.05□□□□□ -1.44
TPM4P67936 RN7SKP153-201ENST00000365026 316 ntBASIC6.05□□□□□ -1.44
TPM4P67936 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM4P67936 SETP15-201ENST00000412724 337 ntBASIC6.05□□□□□ -1.44
TPM4P67936 RPL12P9-201ENST00000412942 488 ntBASIC6.05□□□□□ -1.44
TPM4P67936 MGAT2P2-201ENST00000427194 797 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM4P67936 CST12P-201ENST00000457644 362 ntBASIC6.05□□□□□ -1.44
TPM4P67936 TPT1P1-201ENST00000458495 518 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AC068228.1-201ENST00000461723 211 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AC021660.1-201ENST00000465006 554 ntBASIC6.05□□□□□ -1.44
TPM4P67936 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM4P67936 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.05□□□□□ -1.44
TPM4P67936 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.05□□□□□ -1.44
TPM4P67936 AC100784.1-201ENST00000522790 310 ntBASIC6.05□□□□□ -1.44
TPM4P67936 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.05□□□□□ -1.44
TPM4P67936 AC027369.5-201ENST00000533838 755 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.05□□□□□ -1.44
TPM4P67936 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.05□□□□□ -1.44
TPM4P67936 AC121758.1-202ENST00000556917 658 ntBASIC6.05□□□□□ -1.44
TPM4P67936 OR1E3-201ENST00000575608 948 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AC005828.7-201ENST00000607331 556 ntBASIC6.05□□□□□ -1.44
TPM4P67936 AP001437.1-201ENST00000608783 456 ntBASIC6.05□□□□□ -1.44
TPM4P67936 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TPM4P67936 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TPM4P67936 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 OR9G4-201ENST00000302957 984 ntBASIC6.04□□□□□ -1.44
TPM4P67936 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 RN7SKP250-201ENST00000363924 321 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AL034417.1-201ENST00000399343 800 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AL359885.1-201ENST00000415786 903 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM4P67936 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 AC091874.2-201ENST00000505889 720 ntBASIC6.04□□□□□ -1.44
TPM4P67936 LDHAP1-201ENST00000509421 992 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms