Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 HMGN1P20-201ENST00000411849 300 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AL357752.1-201ENST00000412817 349 ntBASIC5.4□□□□□ -1.54
CASP9P55211 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASP9P55211 TPTE2P1-204ENST00000435256 593 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 GEMIN2P1-201ENST00000454246 752 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.4□□□□□ -1.54
CASP9P55211 PDCL3P4-201ENST00000489621 720 ntBASIC5.4□□□□□ -1.54
CASP9P55211 OR9N1P-201ENST00000491296 333 ntBASIC5.4□□□□□ -1.54
CASP9P55211 RN7SL193P-201ENST00000491708 276 ntBASIC5.4□□□□□ -1.54
CASP9P55211 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.4□□□□□ -1.54
CASP9P55211 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASP9P55211 AC139365.2-201ENST00000517972 253 ntBASIC5.4□□□□□ -1.54
CASP9P55211 WBP1LP3-201ENST00000523033 208 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 AL121594.2-201ENST00000541658 472 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AC079905.1-201ENST00000549280 475 ntBASIC5.4□□□□□ -1.54
CASP9P55211 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.4□□□□□ -1.54
CASP9P55211 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.4□□□□□ -1.54
CASP9P55211 AC008521.2-201ENST00000591021 259 ntBASIC5.4□□□□□ -1.54
CASP9P55211 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASP9P55211 AL035661.1-201ENST00000620459 1144 ntBASIC5.4□□□□□ -1.54
CASP9P55211 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.4□□□□□ -1.55
CASP9P55211 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CASP9P55211 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CASP9P55211 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.4□□□□□ -1.55
CASP9P55211 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CASP9P55211 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CASP9P55211 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
CASP9P55211 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.4□□□□□ -1.55
CASP9P55211 AL138820.1-201ENST00000617901 5305 ntBASIC5.4□□□□□ -1.55
CASP9P55211 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CASP9P55211 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.4□□□□□ -1.55
CASP9P55211 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CASP9P55211 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 VPS35P1-201ENST00000563400 1518 ntBASIC5.39□□□□□ -1.55
CASP9P55211 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
CASP9P55211 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
CASP9P55211 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 AC023490.2-201ENST00000359859 470 ntBASIC5.39□□□□□ -1.55
CASP9P55211 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
CASP9P55211 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CASP9P55211 AC096921.1-201ENST00000411661 375 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AL354868.1-201ENST00000417077 482 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.39□□□□□ -1.55
CASP9P55211 BX323845.3-201ENST00000428215 527 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AC126120.1-201ENST00000431082 470 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.39□□□□□ -1.55
CASP9P55211 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 RN7SL214P-201ENST00000487317 265 ntBASIC5.39□□□□□ -1.55
CASP9P55211 RN7SL57P-201ENST00000493687 290 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 RBBP4P1-201ENST00000502424 1276 ntBASIC5.39□□□□□ -1.55
CASP9P55211 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.39□□□□□ -1.55
CASP9P55211 SCARNA21.2-201ENST00000516600 166 ntBASIC5.39□□□□□ -1.55
CASP9P55211 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 TRAV11-201ENST00000539512 339 ntBASIC5.39□□□□□ -1.55
CASP9P55211 RPA2P1-201ENST00000556557 721 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.39□□□□□ -1.55
CASP9P55211 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.39□□□□□ -1.55
CASP9P55211 AC012213.4-201ENST00000606457 354 ntBASIC5.39□□□□□ -1.55
CASP9P55211 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
CASP9P55211 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.39□□□□□ -1.55
CASP9P55211 AC079776.5-201ENST00000641920 211 ntBASIC5.39□□□□□ -1.55
CASP9P55211 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.39□□□□□ -1.55
CASP9P55211 CASC19-260ENST00000641828 2001 ntBASIC5.39□□□□□ -1.55
CASP9P55211 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CASP9P55211 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.39□□□□□ -1.55
CASP9P55211 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CASP9P55211 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
CASP9P55211 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CASP9P55211 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CASP9P55211 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CASP9P55211 AC025470.1-201ENST00000510053 2032 ntBASIC5.38□□□□□ -1.55
CASP9P55211 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CASP9P55211 AC087565.3-202ENST00000642085 1603 ntBASIC5.38□□□□□ -1.55
CASP9P55211 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
CASP9P55211 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms