Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.56□□□□□ -1.2
CLTCL1P53675 SNX18P3-202ENST00000565670 1750 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.56□□□□□ -1.2
CLTCL1P53675 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.56□□□□□ -1.2
CLTCL1P53675 NUDT19P3-201ENST00000404698 555 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.56□□□□□ -1.2
CLTCL1P53675 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.56□□□□□ -1.2
CLTCL1P53675 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.56□□□□□ -1.2
CLTCL1P53675 TAAR4P-201ENST00000454843 1039 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 snoU13.20-201ENST00000459180 104 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.56□□□□□ -1.2
CLTCL1P53675 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 OR4A17P-201ENST00000526032 904 ntBASIC7.56□□□□□ -1.2
CLTCL1P53675 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLTCL1P53675 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.56□□□□□ -1.2
CLTCL1P53675 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.56□□□□□ -1.2
CLTCL1P53675 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.56□□□□□ -1.2
CLTCL1P53675 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.56□□□□□ -1.2
CLTCL1P53675 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.55□□□□□ -1.2
CLTCL1P53675 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CLTCL1P53675 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.55□□□□□ -1.2
CLTCL1P53675 RNA5SP90-201ENST00000364801 99 ntBASIC7.55□□□□□ -1.2
CLTCL1P53675 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AC006427.1-201ENST00000514359 712 ntBASIC7.55□□□□□ -1.2
CLTCL1P53675 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.55□□□□□ -1.2
CLTCL1P53675 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.55□□□□□ -1.2
CLTCL1P53675 AC104964.3-201ENST00000606115 2860 ntBASIC7.55□□□□□ -1.2
CLTCL1P53675 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLTCL1P53675 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLTCL1P53675 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CLTCL1P53675 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLTCL1P53675 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLTCL1P53675 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CLTCL1P53675 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLTCL1P53675 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CLTCL1P53675 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CLTCL1P53675 RN7SKP185-201ENST00000362813 326 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 RN7SKP149-201ENST00000363008 344 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 RN7SKP103-201ENST00000363848 320 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 RNA5SP428-201ENST00000365129 132 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CLTCL1P53675 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 MGAT2P2-201ENST00000427194 797 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC124944.2-201ENST00000429866 1242 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.54□□□□□ -1.2
CLTCL1P53675 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 AC007686.1-201ENST00000488511 463 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.54□□□□□ -1.2
CLTCL1P53675 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC7.54□□□□□ -1.2
CLTCL1P53675 MIR3934-201ENST00000579806 107 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC073575.2-201ENST00000614212 627 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC034229.2-201ENST00000566945 2508 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 AC015799.1-201ENST00000622996 3122 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 MIPEPP2-201ENST00000422560 1819 ntBASIC7.54□□□□□ -1.2
CLTCL1P53675 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLTCL1P53675 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
CLTCL1P53675 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CLTCL1P53675 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CLTCL1P53675 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CLTCL1P53675 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CLTCL1P53675 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 HMGB1P32-201ENST00000425971 565 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 BX323845.1-201ENST00000432417 179 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CLTCL1P53675 AC093827.1-201ENST00000480094 861 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 BTF3P13-201ENST00000513224 490 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 AL671862.1-201ENST00000515851 349 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 RNA5SP43-201ENST00000516559 110 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.53□□□□□ -1.2
CLTCL1P53675 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms