Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.2□□□□□ -1.42
COPAP53621 AL034546.1-201ENST00000623740 3693 ntBASIC6.2□□□□□ -1.42
COPAP53621 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 RN7SKP69-201ENST00000365390 305 ntBASIC6.2□□□□□ -1.42
COPAP53621 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COPAP53621 AL035405.1-201ENST00000400795 710 ntBASIC6.2□□□□□ -1.42
COPAP53621 GSTA12P-201ENST00000402398 508 ntBASIC6.2□□□□□ -1.42
COPAP53621 AL512422.1-201ENST00000407033 553 ntBASIC6.2□□□□□ -1.42
COPAP53621 AC016027.5-201ENST00000427227 210 ntBASIC6.2□□□□□ -1.42
COPAP53621 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.2□□□□□ -1.42
COPAP53621 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.2□□□□□ -1.42
COPAP53621 ATP5G1P3-201ENST00000463301 410 ntBASIC6.2□□□□□ -1.42
COPAP53621 AC021087.2-201ENST00000504656 1203 ntBASIC6.2□□□□□ -1.42
COPAP53621 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 AC114781.3-201ENST00000512083 142 ntBASIC6.2□□□□□ -1.42
COPAP53621 SCARNA18.1-201ENST00000516330 83 ntBASIC6.2□□□□□ -1.42
COPAP53621 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.2□□□□□ -1.42
COPAP53621 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 AC138701.1-201ENST00000524329 714 ntBASIC6.2□□□□□ -1.42
COPAP53621 AP000859.1-201ENST00000525536 307 ntBASIC6.2□□□□□ -1.42
COPAP53621 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COPAP53621 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.2□□□□□ -1.42
COPAP53621 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC008555.7-201ENST00000605008 583 ntBASIC6.2□□□□□ -1.42
COPAP53621 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 AC090772.4-201ENST00000623599 362 ntBASIC6.2□□□□□ -1.42
COPAP53621 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 AC009452.1-201ENST00000640823 606 ntBASIC6.2□□□□□ -1.42
COPAP53621 OR7A1P-202ENST00000641542 1158 ntBASIC6.2□□□□□ -1.42
COPAP53621 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.2□□□□□ -1.42
COPAP53621 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.2□□□□□ -1.42
COPAP53621 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COPAP53621 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 AC003985.2-201ENST00000562268 1669 ntBASIC6.2□□□□□ -1.42
COPAP53621 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPAP53621 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.2□□□□□ -1.42
COPAP53621 LINC02019-201ENST00000608605 2060 ntBASIC6.19□□□□□ -1.42
COPAP53621 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 AC022164.1-201ENST00000568767 2673 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 ATP5F1P6-201ENST00000402768 767 ntBASIC6.19□□□□□ -1.42
COPAP53621 RSL24D1P1-201ENST00000404972 493 ntBASIC6.19□□□□□ -1.42
COPAP53621 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 RN7SKP206-201ENST00000410823 293 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC069282.1-201ENST00000411911 526 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 AC092570.3-201ENST00000420113 693 ntBASIC6.19□□□□□ -1.42
COPAP53621 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 MTCO2P1-201ENST00000424648 477 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC092651.1-201ENST00000426110 312 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC046176.1-201ENST00000435260 1170 ntBASIC6.19□□□□□ -1.42
COPAP53621 NDUFS5P5-201ENST00000437256 321 ntBASIC6.19□□□□□ -1.42
COPAP53621 TRIM60P16-201ENST00000444048 694 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 ZNF619P1-201ENST00000446539 752 ntBASIC6.19□□□□□ -1.42
COPAP53621 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 ACA64.1-201ENST00000459171 127 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC011476.1-201ENST00000466725 307 ntBASIC6.19□□□□□ -1.42
COPAP53621 PPIAP19-201ENST00000486414 492 ntBASIC6.19□□□□□ -1.42
COPAP53621 AL035690.1-201ENST00000490892 383 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC090058.1-201ENST00000498788 435 ntBASIC6.19□□□□□ -1.42
COPAP53621 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.19□□□□□ -1.42
COPAP53621 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 AP001804.2-201ENST00000533932 910 ntBASIC6.19□□□□□ -1.42
COPAP53621 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 AC093014.1-201ENST00000548926 724 ntBASIC6.19□□□□□ -1.42
COPAP53621 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.19□□□□□ -1.42
COPAP53621 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms