Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.65
NKX2-1P43699 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 FBXL21-201ENST00000297158 1305 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC217777.1-201ENST00000570034 1471 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NKX2-1P43699 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 RNU1-136P-201ENST00000384181 164 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 ARSFP1-201ENST00000398758 477 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 CHMP1B2P-201ENST00000399581 597 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AL033519.1-201ENST00000407266 307 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 OR6K4P-201ENST00000423179 955 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AL136231.1-201ENST00000429407 730 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 GAPDHP19-201ENST00000431768 1005 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 CXCR2P1-202ENST00000443392 1074 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 CYCSP51-201ENST00000443545 318 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 COX4I1P2-201ENST00000447446 547 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 RPL23AP73-201ENST00000492507 471 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 RPSAP51-201ENST00000497462 645 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC010468.3-201ENST00000508225 458 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 BTG4P1-201ENST00000510421 183 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 RNA5SP206-201ENST00000516703 121 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AP003102.1-201ENST00000525638 661 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 CASP1P2-201ENST00000526830 1258 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AP004609.2-201ENST00000532177 190 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC019322.1-201ENST00000571869 389 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 CCDC58P1-201ENST00000578567 430 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC002069.2-201ENST00000603580 883 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AP001823.1-201ENST00000604056 1003 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AL390877.1-201ENST00000605704 214 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-1P43699 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 MIR6774-201ENST00000614651 70 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC096861.1-201ENST00000616652 240 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC022306.3-201ENST00000619930 550 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 AC097063.1-201ENST00000426714 1797 ntBASIC4.77□□□□□ -1.65
NKX2-1P43699 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-1P43699 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-1P43699 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-1P43699 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-1P43699 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC007938.2-201ENST00000604666 2634 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 ZNF90P1-201ENST00000480493 1951 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AL136520.1-201ENST00000600311 1322 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 CASC19-246ENST00000641625 1606 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 RN7SKP78-201ENST00000364711 318 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms