Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HNF4AP41235 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.61□□□□□ -1.51
HNF4AP41235 RNGTTP1-201ENST00000420965 728 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC007064.3-201ENST00000422608 359 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 NPM1P26-201ENST00000426339 738 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC126120.1-201ENST00000431082 470 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 DNAJA1P5-201ENST00000440278 943 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 HMGN1P2-201ENST00000445197 310 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.61□□□□□ -1.51
HNF4AP41235 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 MEMO1P4-201ENST00000453590 386 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 RN7SL72P-201ENST00000460697 269 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.61□□□□□ -1.51
HNF4AP41235 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 AC105384.2-201ENST00000508433 640 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 IGLV3-30-201ENST00000524362 298 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 OR8X1P-201ENST00000534542 869 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 TRAV11-201ENST00000539512 339 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 AC006530.1-201ENST00000555980 571 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HNF4AP41235 FAM27E4-201ENST00000605259 342 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.61□□□□□ -1.51
HNF4AP41235 AL356274.1-201ENST00000617064 410 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 AC024884.1-201ENST00000620583 399 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 MFSD8-239ENST00000641590 2479 ntBASIC5.61□□□□□ -1.51
HNF4AP41235 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 AC132825.1-201ENST00000463573 2247 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 RN7SKP275-201ENST00000364626 301 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 AL034403.1-201ENST00000399414 885 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 BX284632.2-201ENST00000421091 399 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 RPL23AP4-201ENST00000427757 463 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 Z85994.2-201ENST00000434327 452 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 PCBP2P1-201ENST00000437262 977 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AL512605.1-202ENST00000441919 381 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 AL359955.2-201ENST00000445380 353 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 AC022431.1-201ENST00000450941 438 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 OR52E7P-201ENST00000452394 933 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC093166.4-201ENST00000457867 318 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC037198.2-201ENST00000478845 733 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC093827.1-201ENST00000480094 861 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.6□□□□□ -1.51
HNF4AP41235 PFN1P8-201ENST00000497012 543 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 SNORA70.11-201ENST00000515987 138 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 SNORA70.13-201ENST00000516116 138 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.6□□□□□ -1.51
HNF4AP41235 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.6□□□□□ -1.51
HNF4AP41235 AC084759.1-201ENST00000561168 290 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 AC005726.4-201ENST00000582858 458 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 MIR4260-201ENST00000583107 67 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 HIRAP1-201ENST00000605318 787 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AL353729.2-201ENST00000605859 1249 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AL391597.1-201ENST00000618707 694 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 AC021106.3-201ENST00000623925 531 ntBASIC5.6□□□□□ -1.51
HNF4AP41235 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.6□□□□□ -1.51
HNF4AP41235 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HNF4AP41235 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms