Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 OR9L1P-201ENST00000529493 933 ntBASIC6.56□□□□□ -1.36
LTBRP36941 PDCL2P2-201ENST00000533651 189 ntBASIC6.56□□□□□ -1.36
LTBRP36941 DPRXP4-201ENST00000578053 568 ntBASIC6.56□□□□□ -1.36
LTBRP36941 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.56□□□□□ -1.36
LTBRP36941 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.56□□□□□ -1.36
LTBRP36941 COX6CP7-201ENST00000597056 208 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AL513548.2-201ENST00000602994 1207 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AC018618.2-201ENST00000604770 446 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AC135507.1-201ENST00000607214 561 ntBASIC6.56□□□□□ -1.36
LTBRP36941 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 AC016769.4-201ENST00000616893 535 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AC073569.3-201ENST00000619055 682 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AC131009.3-201ENST00000621809 287 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AC018445.2-201ENST00000622987 260 ntBASIC6.56□□□□□ -1.36
LTBRP36941 RPL23AP61-201ENST00000623642 466 ntBASIC6.56□□□□□ -1.36
LTBRP36941 AL049536.1-201ENST00000625043 744 ntBASIC6.56□□□□□ -1.36
LTBRP36941 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 CASC19-205ENST00000641013 1411 ntBASIC6.56□□□□□ -1.36
LTBRP36941 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.56□□□□□ -1.36
LTBRP36941 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.56□□□□□ -1.36
LTBRP36941 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 LINC02035-201ENST00000610128 5476 ntBASIC6.56□□□□□ -1.36
LTBRP36941 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LTBRP36941 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 Y_RNA.51-201ENST00000362725 102 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RNA5SP443-201ENST00000363083 132 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RNU1-49P-201ENST00000363468 159 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RNU4-4P-201ENST00000364588 130 ntBASIC6.55□□□□□ -1.36
LTBRP36941 SNORD116.1-201ENST00000365628 92 ntBASIC6.55□□□□□ -1.36
LTBRP36941 ERHP2-201ENST00000402323 299 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AL132875.1-201ENST00000403623 949 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RPS3AP2-201ENST00000407190 754 ntBASIC6.55□□□□□ -1.36
LTBRP36941 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.55□□□□□ -1.36
LTBRP36941 AC096537.2-201ENST00000413707 714 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.55□□□□□ -1.36
LTBRP36941 DUTP4-201ENST00000424782 475 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 AC234781.2-201ENST00000426370 994 ntBASIC6.55□□□□□ -1.36
LTBRP36941 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 OR3D1P-201ENST00000438288 955 ntBASIC6.55□□□□□ -1.36
LTBRP36941 MTND5P2-201ENST00000442927 1142 ntBASIC6.55□□□□□ -1.36
LTBRP36941 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 MTND6P5-201ENST00000448266 512 ntBASIC6.55□□□□□ -1.36
LTBRP36941 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 AC233982.1-201ENST00000451247 436 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 ANKRD26P4-201ENST00000455755 950 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 RNU7-125P-201ENST00000458760 62 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AC108734.3-201ENST00000481241 1165 ntBASIC6.55□□□□□ -1.36
LTBRP36941 RN7SL705P-201ENST00000481678 294 ntBASIC6.55□□□□□ -1.36
LTBRP36941 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 AP001858.2-201ENST00000536213 601 ntBASIC6.55□□□□□ -1.36
LTBRP36941 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 AC023161.2-201ENST00000551218 780 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 AC022662.1-201ENST00000580252 331 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.55□□□□□ -1.36
LTBRP36941 VN1R83P-201ENST00000595685 445 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.55□□□□□ -1.36
LTBRP36941 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.55□□□□□ -1.36
LTBRP36941 SUMO2P15-201ENST00000604285 278 ntBASIC6.55□□□□□ -1.36
LTBRP36941 AL354976.1-201ENST00000613843 387 ntBASIC6.55□□□□□ -1.36
LTBRP36941 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms