Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL078621.3-201ENST00000623707 2042 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 AL359955.1-201ENST00000455242 3275 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 AL391361.1-201ENST00000405580 489 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 RNF10P1-201ENST00000418589 369 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 RNGTTP1-201ENST00000420965 728 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 NFYAP1-201ENST00000431953 972 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC006335.2-201ENST00000437993 330 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM23P36406 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 RPL5P22-201ENST00000480199 884 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 RPS7P6-201ENST00000485777 579 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
TRIM23P36406 PDCL3P4-201ENST00000489621 720 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 IGLV3-24-201ENST00000517477 197 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM23P36406 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 AC139697.1-201ENST00000548429 745 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM23P36406 MRPS21P7-201ENST00000566937 238 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM23P36406 MIR4311-201ENST00000580794 100 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM23P36406 AP001267.4-201ENST00000602598 545 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC087468.1-201ENST00000604365 630 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 HIRAP1-201ENST00000605318 787 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM23P36406 AC010245.2-201ENST00000606908 1167 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 AC093388.1-201ENST00000609166 430 ntBASIC5.58□□□□□ -1.52
TRIM23P36406 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM23P36406 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM23P36406 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
TRIM23P36406 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM23P36406 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM23P36406 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM23P36406 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 RPL11P3-201ENST00000395256 523 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 RPS6P23-201ENST00000413224 722 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 AL354766.1-201ENST00000423396 542 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM23P36406 AC019185.1-201ENST00000442718 389 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 SPRYD7P1-201ENST00000443861 570 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 AC108693.1-201ENST00000496068 432 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM23P36406 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM23P36406 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM23P36406 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM23P36406 AC090022.1-201ENST00000546569 311 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM23P36406 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM23P36406 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 PPATP2-201ENST00000605635 508 ntBASIC5.57□□□□□ -1.52
TRIM23P36406 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM23P36406 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM23P36406 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM23P36406 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM23P36406 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM23P36406 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM23P36406 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM23P36406 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM23P36406 PWAR1-201ENST00000624188 2414 ntBASIC5.56□□□□□ -1.52
TRIM23P36406 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM23P36406 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM23P36406 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM23P36406 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM23P36406 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM23P36406 RNU4-2-201ENST00000365668 141 ntBASIC5.56□□□□□ -1.52
TRIM23P36406 RNU1-136P-201ENST00000384181 164 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms