Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.52□□□□□ -1.37
POLR2AP24928 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
POLR2AP24928 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.52□□□□□ -1.37
POLR2AP24928 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.52□□□□□ -1.37
POLR2AP24928 MFSD8-213ENST00000641134 1327 ntBASIC6.52□□□□□ -1.37
POLR2AP24928 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.52□□□□□ -1.37
POLR2AP24928 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
POLR2AP24928 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.52□□□□□ -1.37
POLR2AP24928 AC022819.1-201ENST00000563495 3910 ntBASIC6.52□□□□□ -1.37
POLR2AP24928 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.52□□□□□ -1.37
POLR2AP24928 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
POLR2AP24928 AC068446.1-201ENST00000556425 1549 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.51□□□□□ -1.37
POLR2AP24928 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 AC016027.5-201ENST00000427227 210 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 RRM2P4-201ENST00000441721 562 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 RPS3AP6-201ENST00000484430 795 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 RN7SL447P-201ENST00000494711 245 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC023538.1-201ENST00000534576 736 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.51□□□□□ -1.37
POLR2AP24928 AL049779.3-201ENST00000557141 606 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC006116.7-201ENST00000590141 756 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC006116.5-201ENST00000591936 559 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC040174.2-201ENST00000602701 465 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC006963.1-201ENST00000624003 1052 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.51□□□□□ -1.37
POLR2AP24928 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 AP004289.1-201ENST00000436307 2205 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.51□□□□□ -1.37
POLR2AP24928 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 AL121886.1-201ENST00000358609 435 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
POLR2AP24928 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 VPS26BP1-201ENST00000417155 755 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC092647.3-201ENST00000443044 633 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AL672138.1-201ENST00000450604 1015 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.51□□□□□ -1.37
POLR2AP24928 AC034244.2-201ENST00000514668 858 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 AC015660.5-201ENST00000623238 564 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.51□□□□□ -1.37
POLR2AP24928 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.51□□□□□ -1.37
POLR2AP24928 MT-RNR2-201ENST00000387347 1559 ntBASIC6.51□□□□□ -1.37
POLR2AP24928 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
POLR2AP24928 OR51C1P-202ENST00000641159 1444 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 OLMALINC-203ENST00000641087 3779 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC009831.5-201ENST00000624000 3189 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 AL359195.2-201ENST00000623657 4412 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC012618.3-205ENST00000637896 1496 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
POLR2AP24928 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.5□□□□□ -1.37
POLR2AP24928 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.5□□□□□ -1.37
POLR2AP24928 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.5□□□□□ -1.37
POLR2AP24928 AC097484.1-201ENST00000471148 389 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC096741.1-201ENST00000472250 846 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 RPL5P22-201ENST00000480199 884 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC068522.1-201ENST00000482895 345 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.5□□□□□ -1.37
POLR2AP24928 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.5□□□□□ -1.37
POLR2AP24928 AC117525.1-201ENST00000515228 503 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 AC063949.1-201ENST00000552900 865 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC091193.1-201ENST00000604640 448 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.5□□□□□ -1.37
POLR2AP24928 AC138627.1-204ENST00000641894 765 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 EIF3EP2-201ENST00000423042 1814 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AC110716.2-201ENST00000563865 3945 ntBASIC6.5□□□□□ -1.37
POLR2AP24928 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
POLR2AP24928 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
POLR2AP24928 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.5□□□□□ -1.37
POLR2AP24928 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms