Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 GAPDHP71-201ENST00000511530 1003 ntBASIC6.24□□□□□ -1.41
BDNFP23560 MTATP6P1-201ENST00000514057 681 ntBASIC6.24□□□□□ -1.41
BDNFP23560 RN7SKP288-201ENST00000516227 268 ntBASIC6.24□□□□□ -1.41
BDNFP23560 IGLVIV-64-201ENST00000518581 301 ntBASIC6.24□□□□□ -1.41
BDNFP23560 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.24□□□□□ -1.41
BDNFP23560 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.24□□□□□ -1.41
BDNFP23560 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.24□□□□□ -1.41
BDNFP23560 IGLV3-30-201ENST00000524362 298 ntBASIC6.24□□□□□ -1.41
BDNFP23560 AC125612.1-201ENST00000547580 377 ntBASIC6.24□□□□□ -1.41
BDNFP23560 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.24□□□□□ -1.41
BDNFP23560 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.24□□□□□ -1.41
BDNFP23560 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.24□□□□□ -1.41
BDNFP23560 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.24□□□□□ -1.41
BDNFP23560 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.24□□□□□ -1.41
BDNFP23560 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.24□□□□□ -1.41
BDNFP23560 AC145423.1-201ENST00000605712 336 ntBASIC6.24□□□□□ -1.41
BDNFP23560 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 AC104820.1-201ENST00000624183 307 ntBASIC6.24□□□□□ -1.41
BDNFP23560 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BDNFP23560 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BDNFP23560 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.24□□□□□ -1.41
BDNFP23560 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BDNFP23560 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.24□□□□□ -1.41
BDNFP23560 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.24□□□□□ -1.41
BDNFP23560 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.23□□□□□ -1.41
BDNFP23560 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BDNFP23560 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 RNU6-666P-201ENST00000363499 107 ntBASIC6.23□□□□□ -1.41
BDNFP23560 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BDNFP23560 RN7SKP29-201ENST00000410957 272 ntBASIC6.23□□□□□ -1.41
BDNFP23560 MRPL53P1-201ENST00000414323 319 ntBASIC6.23□□□□□ -1.41
BDNFP23560 HSPE1P16-201ENST00000426640 348 ntBASIC6.23□□□□□ -1.41
BDNFP23560 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.23□□□□□ -1.41
BDNFP23560 AL663074.2-201ENST00000440621 479 ntBASIC6.23□□□□□ -1.41
BDNFP23560 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 RPL31P15-201ENST00000449770 338 ntBASIC6.23□□□□□ -1.41
BDNFP23560 TAAR4P-201ENST00000454843 1039 ntBASIC6.23□□□□□ -1.41
BDNFP23560 PFN1P6-201ENST00000476786 399 ntBASIC6.23□□□□□ -1.41
BDNFP23560 PPIAP19-201ENST00000486414 492 ntBASIC6.23□□□□□ -1.41
BDNFP23560 RPL7P51-201ENST00000490532 749 ntBASIC6.23□□□□□ -1.41
BDNFP23560 AC104109.1-201ENST00000498563 436 ntBASIC6.23□□□□□ -1.41
BDNFP23560 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.23□□□□□ -1.41
BDNFP23560 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.23□□□□□ -1.41
BDNFP23560 SNORA70.11-201ENST00000515987 138 ntBASIC6.23□□□□□ -1.41
BDNFP23560 SNORA70.13-201ENST00000516116 138 ntBASIC6.23□□□□□ -1.41
BDNFP23560 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 IGKV3D-34-201ENST00000522638 302 ntBASIC6.23□□□□□ -1.41
BDNFP23560 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.23□□□□□ -1.41
BDNFP23560 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AC079600.1-201ENST00000550326 297 ntBASIC6.23□□□□□ -1.41
BDNFP23560 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.23□□□□□ -1.41
BDNFP23560 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AL139099.4-201ENST00000614802 114 ntBASIC6.23□□□□□ -1.41
BDNFP23560 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AC103703.1-201ENST00000634783 663 ntBASIC6.23□□□□□ -1.41
BDNFP23560 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 AC106872.5-201ENST00000508856 1416 ntBASIC6.23□□□□□ -1.41
BDNFP23560 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BDNFP23560 AC009229.4-201ENST00000623854 1947 ntBASIC6.23□□□□□ -1.41
BDNFP23560 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.23□□□□□ -1.41
BDNFP23560 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
BDNFP23560 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BDNFP23560 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.22□□□□□ -1.41
BDNFP23560 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.22□□□□□ -1.41
BDNFP23560 SMG1P6-201ENST00000532337 2930 ntBASIC6.22□□□□□ -1.41
BDNFP23560 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BDNFP23560 AC005725.1-201ENST00000577346 2607 ntBASIC6.22□□□□□ -1.41
BDNFP23560 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BDNFP23560 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BDNFP23560 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.22□□□□□ -1.41
BDNFP23560 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.22□□□□□ -1.41
BDNFP23560 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BDNFP23560 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BDNFP23560 TMSB4XP4-201ENST00000323496 618 ntBASIC6.22□□□□□ -1.41
BDNFP23560 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BDNFP23560 RN7SKP292-201ENST00000365522 317 ntBASIC6.22□□□□□ -1.41
BDNFP23560 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BDNFP23560 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BDNFP23560 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.22□□□□□ -1.41
BDNFP23560 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.22□□□□□ -1.41
BDNFP23560 MRPS21P2-201ENST00000424704 264 ntBASIC6.22□□□□□ -1.41
BDNFP23560 NAP1L4P2-201ENST00000425958 899 ntBASIC6.22□□□□□ -1.41
BDNFP23560 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.22□□□□□ -1.41
BDNFP23560 RPL36AP39-201ENST00000445859 318 ntBASIC6.22□□□□□ -1.41
BDNFP23560 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms