Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CAPN3P20807 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CAPN3P20807 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CAPN3P20807 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
CAPN3P20807 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC024341.1-201ENST00000526444 1552 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AF287957.1-201ENST00000607368 1595 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.8□□□□□ -1.48
CAPN3P20807 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 AC024651.2-201ENST00000562480 2098 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 RNA5SP375-201ENST00000362975 119 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 U3.10-201ENST00000364459 214 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 RNA5SP77-201ENST00000365394 120 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 RNU11-201ENST00000387069 134 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CAPN3P20807 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CAPN3P20807 SNORA17A-201ENST00000391185 133 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AC003045.1-201ENST00000398779 713 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.8□□□□□ -1.48
CAPN3P20807 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC092865.3-201ENST00000425390 1026 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 GTF3AP6-201ENST00000432585 986 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 ARL4AP4-201ENST00000434170 518 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 CLUHP1-201ENST00000435012 1190 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 RPL6P30-201ENST00000443382 862 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 CASP3P1-201ENST00000446037 609 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 NPM1P19-201ENST00000450070 712 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AL354710.1-201ENST00000453641 246 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 RNU7-27P-201ENST00000459281 62 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AC068228.1-201ENST00000461723 211 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 RN7SL174P-201ENST00000475578 289 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.8□□□□□ -1.48
CAPN3P20807 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 HIGD1AP18-201ENST00000520730 278 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 NANOGNBP2-201ENST00000544753 553 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CAPN3P20807 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC026898.1-201ENST00000586404 571 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.8□□□□□ -1.48
CAPN3P20807 AC025857.2-201ENST00000602711 238 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AL360012.1-201ENST00000602813 131 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AL645927.2-201ENST00000618350 349 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AP001005.3-201ENST00000622049 129 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AL356094.1-201ENST00000624663 1212 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 SNORA17.5-201ENST00000630429 132 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.8□□□□□ -1.48
CAPN3P20807 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 RARSP1-201ENST00000542842 1418 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CAPN3P20807 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CAPN3P20807 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
CAPN3P20807 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CAPN3P20807 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.79□□□□□ -1.48
CAPN3P20807 AC140134.1-201ENST00000511830 3544 ntBASIC5.79□□□□□ -1.48
CAPN3P20807 HSPD1P9-201ENST00000420325 1636 ntBASIC5.79□□□□□ -1.48
CAPN3P20807 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN3P20807 COX6B1P3-201ENST00000312310 260 ntBASIC5.79□□□□□ -1.48
CAPN3P20807 AL157702.1-201ENST00000398764 426 ntBASIC5.79□□□□□ -1.48
CAPN3P20807 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms