Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC105384.2-201ENST00000508433 640 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 NPM1P52-201ENST00000518264 846 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 SEC11B-201ENST00000518383 499 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC021451.1-201ENST00000523498 1129 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC233266.2-201ENST00000567067 528 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AP005119.1-201ENST00000580956 292 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC012254.3-201ENST00000591183 2117 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 uc_338.29-201ENST00000615099 168 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC015712.7-201ENST00000615211 635 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AP000676.4-201ENST00000624659 623 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 AC009501.3-201ENST00000605001 1352 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 RBPJP7-201ENST00000442803 1447 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 RBPJP5-201ENST00000449433 1447 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 NCOA4P2-201ENST00000340589 1813 ntBASIC5.37□□□□□ -1.55
TNFRSF1BP20333 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFRSF1BP20333 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RN7SKP185-201ENST00000362813 326 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RNA5SP279-201ENST00000365513 117 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 TAS2R15P-201ENST00000390674 928 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RPL11P3-201ENST00000395256 523 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL354890.1-201ENST00000413730 346 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MTCO2P20-201ENST00000437339 673 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL117351.1-201ENST00000438864 766 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 ARL5AP3-201ENST00000439327 386 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 XKRY2-201ENST00000442362 1093 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RPL7P61-201ENST00000451721 751 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RNU1-88P-201ENST00000459274 128 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC096992.1-201ENST00000459808 709 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 OR7E157P-201ENST00000494376 911 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 HMGB1P47-201ENST00000511281 589 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC119751.5-201ENST00000514077 770 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 RNU5A-7P-201ENST00000515979 116 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 NPM1P35-201ENST00000533043 868 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC023538.1-201ENST00000534576 736 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AL163952.1-202ENST00000569625 600 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MIR4509-3-201ENST00000578671 94 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AP001496.3-201ENST00000580230 913 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MIR4509-2-201ENST00000583920 94 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 MTCO2P2-201ENST00000591258 225 ntBASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFRSF1BP20333 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms