Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC135999.1-201ENST00000478962 479 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 RPL23AP73-201ENST00000492507 471 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 HMGB1P47-201ENST00000511281 589 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC092121.1-201ENST00000569452 202 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC067773.1-201ENST00000603284 1094 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 MTATP6P2-201ENST00000603319 678 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC034229.4-201ENST00000607861 441 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC022400.9-201ENST00000623633 273 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AC129778.1-202ENST00000623812 261 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AL591379.1-207ENST00000635982 261 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.13□□□□□ -1.59
HLA-DOBP13765 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DOBP13765 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOBP13765 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 RPL11P3-201ENST00000395256 523 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 RAB5CP1-201ENST00000395972 580 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 ST13P16-201ENST00000401760 781 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 RNU2-18P-201ENST00000411224 162 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 NIFKP3-201ENST00000417799 865 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL035660.1-201ENST00000422041 222 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 VN1R21P-201ENST00000426703 765 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 CDY8P-201ENST00000428380 1279 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 CDY20P-201ENST00000447528 1279 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL451063.1-201ENST00000450164 1133 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 ATP5G1P3-201ENST00000463301 410 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC009120.1-201ENST00000493458 473 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 RNU6-415P-201ENST00000516252 97 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 SCARNA6.1-201ENST00000516989 238 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC060775.1-201ENST00000518241 520 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC138701.1-201ENST00000524329 714 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AP000648.1-201ENST00000529682 397 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC068339.2-201ENST00000534395 618 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AP001496.3-201ENST00000580230 913 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DOBP13765 MIR4760-201ENST00000585040 80 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL138895.2-201ENST00000603019 178 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL031601.1-201ENST00000605702 394 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC093388.1-201ENST00000609166 430 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC104763.3-201ENST00000613765 618 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOBP13765 AL031658.2-201ENST00000616850 651 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 AC079298.2-201ENST00000623885 459 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 OR8G3P-202ENST00000641572 1255 ntBASIC5.12□□□□□ -1.59
HLA-DOBP13765 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms