Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 HMGN1P9-201ENST00000515212 298 ntBASIC6.02□□□□□ -1.45
TPM1P09493 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 AC127381.1-201ENST00000555979 939 ntBASIC6.02□□□□□ -1.45
TPM1P09493 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.02□□□□□ -1.45
TPM1P09493 MTCYBP13-201ENST00000578634 1093 ntBASIC6.02□□□□□ -1.45
TPM1P09493 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.02□□□□□ -1.45
TPM1P09493 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM1P09493 MIR6774-201ENST00000614651 70 ntBASIC6.02□□□□□ -1.45
TPM1P09493 uc_338.29-201ENST00000615099 168 ntBASIC6.02□□□□□ -1.45
TPM1P09493 MIR6737-201ENST00000617385 70 ntBASIC6.02□□□□□ -1.45
TPM1P09493 AL390318.1-201ENST00000624564 687 ntBASIC6.02□□□□□ -1.45
TPM1P09493 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM1P09493 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM1P09493 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM1P09493 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 RNA5SP500-201ENST00000364486 119 ntBASIC6.01□□□□□ -1.45
TPM1P09493 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 OR6C64P-201ENST00000419708 825 ntBASIC6.01□□□□□ -1.45
TPM1P09493 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.01□□□□□ -1.45
TPM1P09493 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 PNKDP1-201ENST00000435914 430 ntBASIC6.01□□□□□ -1.45
TPM1P09493 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.01□□□□□ -1.45
TPM1P09493 RPS19P6-201ENST00000441327 433 ntBASIC6.01□□□□□ -1.45
TPM1P09493 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 PRPF38AP1-201ENST00000451976 933 ntBASIC6.01□□□□□ -1.45
TPM1P09493 PPIAP27-201ENST00000453800 265 ntBASIC6.01□□□□□ -1.45
TPM1P09493 RPS17P15-201ENST00000475609 349 ntBASIC6.01□□□□□ -1.45
TPM1P09493 AC091544.1-201ENST00000484702 348 ntBASIC6.01□□□□□ -1.45
TPM1P09493 IGKV3D-25-201ENST00000519599 235 ntBASIC6.01□□□□□ -1.45
TPM1P09493 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.01□□□□□ -1.45
TPM1P09493 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.01□□□□□ -1.45
TPM1P09493 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TPM1P09493 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.01□□□□□ -1.45
TPM1P09493 AC108738.1-201ENST00000603703 237 ntBASIC6.01□□□□□ -1.45
TPM1P09493 AC022919.1-201ENST00000624979 626 ntBASIC6.01□□□□□ -1.45
TPM1P09493 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 Z83820.1-201ENST00000456978 1499 ntBASIC6.01□□□□□ -1.45
TPM1P09493 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 AL731566.1-201ENST00000620490 1937 ntBASIC6.01□□□□□ -1.45
TPM1P09493 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TPM1P09493 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM1P09493 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TPM1P09493 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TPM1P09493 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TPM1P09493 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TPM1P09493 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 RN7SKP250-201ENST00000363924 321 ntBASIC6□□□□□ -1.45
TPM1P09493 AC007618.1-201ENST00000366455 732 ntBASIC6□□□□□ -1.45
TPM1P09493 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 AL034417.1-201ENST00000399343 800 ntBASIC6□□□□□ -1.45
TPM1P09493 AL359885.1-201ENST00000415786 903 ntBASIC6□□□□□ -1.45
TPM1P09493 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6□□□□□ -1.45
TPM1P09493 AC017019.1-201ENST00000426129 261 ntBASIC6□□□□□ -1.45
TPM1P09493 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 AC245028.2-201ENST00000458673 253 ntBASIC6□□□□□ -1.45
TPM1P09493 AC087672.1-201ENST00000479876 766 ntBASIC6□□□□□ -1.45
TPM1P09493 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 IGBP1P4-201ENST00000503202 879 ntBASIC6□□□□□ -1.45
TPM1P09493 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6□□□□□ -1.45
TPM1P09493 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6□□□□□ -1.45
TPM1P09493 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6□□□□□ -1.45
TPM1P09493 HSPE1P2-201ENST00000554777 306 ntBASIC6□□□□□ -1.45
TPM1P09493 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TPM1P09493 AC121758.1-202ENST00000556917 658 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms