Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.05□□□□□ -1.6
SPTA1P02549 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 AL022322.2-201ENST00000624072 20397 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SPTA1P02549 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC5.05□□□□□ -1.6
SPTA1P02549 CASC19-281ENST00000642118 1554 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.05□□□□□ -1.6
SPTA1P02549 AC112187.1-201ENST00000455837 479 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.05□□□□□ -1.6
SPTA1P02549 CYP4F27P-201ENST00000514557 494 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.05□□□□□ -1.6
SPTA1P02549 AC126615.2-201ENST00000553003 515 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.05□□□□□ -1.6
SPTA1P02549 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.05□□□□□ -1.6
SPTA1P02549 AC068724.3-201ENST00000625906 87 ntBASIC5.05□□□□□ -1.6
SPTA1P02549 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SPTA1P02549 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SPTA1P02549 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPTA1P02549 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 AC007938.2-201ENST00000604666 2634 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 RNU6-398P-201ENST00000384143 109 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 AL078599.1-201ENST00000402075 293 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 AC007161.1-204ENST00000423039 460 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.04□□□□□ -1.6
SPTA1P02549 AP002373.2-201ENST00000541631 1060 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 AC025574.2-201ENST00000615621 514 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SPTA1P02549 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SPTA1P02549 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SPTA1P02549 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.04□□□□□ -1.6
SPTA1P02549 RNA5SP123-201ENST00000363244 119 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC093162.1-201ENST00000419682 124 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 snoU13.1-201ENST00000459157 104 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SPTA1P02549 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 EDDM3DP-201ENST00000554692 434 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 DPPA3P2-202ENST00000557188 1219 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 MIR4284-201ENST00000578924 81 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 AC099654.6-201ENST00000636487 512 ntBASIC5.04□□□□□ -1.6
SPTA1P02549 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SPTA1P02549 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SPTA1P02549 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SPTA1P02549 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.04□□□□□ -1.6
SPTA1P02549 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.03□□□□□ -1.6
SPTA1P02549 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 ZNF101P1-201ENST00000435701 1720 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 SNURFL-201ENST00000309296 343 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC068287.1-201ENST00000430283 295 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.03□□□□□ -1.6
SPTA1P02549 RPL7P11-201ENST00000437586 658 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.03□□□□□ -1.6
SPTA1P02549 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC095055.1-201ENST00000603472 1113 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 NANOGP3-201ENST00000605855 286 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms