Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 NR1H5P-201ENST00000452683 1377 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AP001273.1-201ENST00000624493 3152 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL360270.2-201ENST00000562952 5985 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RNFT1P3-201ENST00000340898 1052 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RN7SKP292-201ENST00000365522 317 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MIR191-201ENST00000384873 92 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC017078.1-201ENST00000416146 368 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MARK2P12-201ENST00000420129 585 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 VN1R110P-201ENST00000438988 971 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 KF459542.1-201ENST00000450908 553 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL445433.1-201ENST00000457507 257 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RPSAP37-201ENST00000470913 821 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL122020.1-201ENST00000472287 459 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC098847.1-201ENST00000473094 348 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RPS17P15-201ENST00000475609 349 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RN7SL583P-201ENST00000475692 287 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RPL29P23-201ENST00000486188 442 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RN7SL814P-201ENST00000487715 300 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 ARL4AP1-201ENST00000503220 705 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC091874.2-201ENST00000505889 720 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 SETP21-201ENST00000514799 892 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 SCARNA18.1-201ENST00000516330 83 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 SCARNA6.1-201ENST00000516989 238 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RN7SKP35-201ENST00000517210 151 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 IGKV3D-25-201ENST00000519599 235 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC116917.1-201ENST00000520558 305 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC022360.1-201ENST00000521058 340 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 CASP1P2-201ENST00000526830 1258 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AP003396.4-201ENST00000527574 265 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 OR4A41P-201ENST00000533053 928 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 OR8G3P-201ENST00000533406 921 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL390334.1-201ENST00000556395 450 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AL356801.1-201ENST00000559320 294 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 OOSP1P2-201ENST00000579644 351 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC063977.5-201ENST00000601044 974 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC092266.1-201ENST00000610958 165 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 uc_338.29-201ENST00000615099 168 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MIR6721-201ENST00000617181 87 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 AC093225.1-201ENST00000506867 1408 ntBASIC4.68□□□□□ -1.66
HLA-DQB1P01920 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB1P01920 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 PDZK1P1-202ENST00000425209 1350 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC021242.1-201ENST00000507315 2035 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AF287957.1-201ENST00000607368 1595 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 RNU1-19P-201ENST00000363306 165 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 GCNT1P4-201ENST00000404096 329 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms