Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC4O75487 MIR365B-201ENST00000362317 111 ntBASIC5.72□□□□□ -1.49
GPC4O75487 OR1F12-201ENST00000402365 945 ntBASIC5.72□□□□□ -1.49
GPC4O75487 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC4O75487 AL158827.1-201ENST00000416300 391 ntBASIC5.72□□□□□ -1.49
GPC4O75487 CR848007.2-201ENST00000424918 787 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AL445528.1-201ENST00000426330 420 ntBASIC5.72□□□□□ -1.49
GPC4O75487 NPM1P26-201ENST00000426339 738 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC115283.1-201ENST00000427353 400 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC4O75487 EIF5AP4-201ENST00000441206 465 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC015983.1-201ENST00000441577 373 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC4O75487 HMGN1P2-201ENST00000445197 310 ntBASIC5.72□□□□□ -1.49
GPC4O75487 NPM1P19-201ENST00000450070 712 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC004129.2-201ENST00000457229 287 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC117394.1-201ENST00000477323 567 ntBASIC5.72□□□□□ -1.49
GPC4O75487 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.72□□□□□ -1.49
GPC4O75487 NANOGNBP2-201ENST00000544753 553 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC4O75487 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC4O75487 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.72□□□□□ -1.49
GPC4O75487 AC067773.1-201ENST00000603284 1094 ntBASIC5.72□□□□□ -1.49
GPC4O75487 AC005618.4-201ENST00000625053 554 ntBASIC5.72□□□□□ -1.49
GPC4O75487 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.72□□□□□ -1.49
GPC4O75487 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
GPC4O75487 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC4O75487 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC4O75487 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GPC4O75487 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC4O75487 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
GPC4O75487 FBXL21-201ENST00000297158 1305 ntBASIC5.72□□□□□ -1.49
GPC4O75487 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC4O75487 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC4O75487 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC4O75487 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC4O75487 MFSD8-239ENST00000641590 2479 ntBASIC5.71□□□□□ -1.49
GPC4O75487 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC4O75487 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GPC4O75487 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GPC4O75487 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GPC4O75487 AL589655.1-201ENST00000405398 482 ntBASIC5.71□□□□□ -1.5
GPC4O75487 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 BX323845.3-201ENST00000428215 527 ntBASIC5.71□□□□□ -1.5
GPC4O75487 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
GPC4O75487 PCBP2P1-201ENST00000437262 977 ntBASIC5.71□□□□□ -1.5
GPC4O75487 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AC093166.4-201ENST00000457867 318 ntBASIC5.71□□□□□ -1.5
GPC4O75487 RPS17P15-201ENST00000475609 349 ntBASIC5.71□□□□□ -1.5
GPC4O75487 OR7E157P-201ENST00000494376 911 ntBASIC5.71□□□□□ -1.5
GPC4O75487 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC4O75487 GOLGA5P1-201ENST00000507317 980 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.71□□□□□ -1.5
GPC4O75487 COL6A4P2-205ENST00000509855 506 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GPC4O75487 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 HMGN2P36-201ENST00000529541 409 ntBASIC5.71□□□□□ -1.5
GPC4O75487 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC4O75487 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 AL138895.2-201ENST00000603019 178 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AC006363.1-201ENST00000603806 463 ntBASIC5.71□□□□□ -1.5
GPC4O75487 RNU6-84P-201ENST00000607737 102 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AL162233.1-201ENST00000620014 944 ntBASIC5.71□□□□□ -1.5
GPC4O75487 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.71□□□□□ -1.5
GPC4O75487 AC129915.3-201ENST00000634128 948 ntBASIC5.71□□□□□ -1.5
GPC4O75487 MIR1910-201ENST00000636955 80 ntBASIC5.71□□□□□ -1.5
GPC4O75487 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
GPC4O75487 OR10AB1P-202ENST00000641219 1686 ntBASIC5.71□□□□□ -1.5
GPC4O75487 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
GPC4O75487 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC4O75487 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC4O75487 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 AP004607.3-201ENST00000530354 3915 ntBASIC5.7□□□□□ -1.5
GPC4O75487 MFSD8-219ENST00000641228 2559 ntBASIC5.7□□□□□ -1.5
GPC4O75487 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC4O75487 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC4O75487 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC4O75487 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC4O75487 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC4O75487 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms