Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 PSG10P-201ENST00000501199 1500 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 ZNF90P1-201ENST00000480493 1951 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
TRIM38O00635 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC022164.1-201ENST00000568767 2673 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM38O00635 AL132875.1-201ENST00000403623 949 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC079355.1-201ENST00000421770 223 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 RPL12P12-201ENST00000424633 501 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 OR3D1P-201ENST00000438288 955 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AL353898.1-201ENST00000444055 238 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 RPL23AP23-201ENST00000452590 471 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC010343.2-201ENST00000510162 224 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM38O00635 Y_RNA.710-201ENST00000516975 110 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AP001858.2-201ENST00000536213 601 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC009120.3-201ENST00000563335 499 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC025165.5-201ENST00000602802 578 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 AL139022.2-201ENST00000606934 443 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AC063944.3-201ENST00000609969 533 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 AC109309.2-201ENST00000612597 332 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 AC138907.10-201ENST00000623708 983 ntBASIC6.07□□□□□ -1.44
TRIM38O00635 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM38O00635 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM38O00635 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM38O00635 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM38O00635 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM38O00635 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM38O00635 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM38O00635 TMSB4XP4-201ENST00000323496 618 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 SNORA63.3-201ENST00000362682 132 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 RNU6-1263P-201ENST00000384601 106 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 TAF9BP2-201ENST00000400856 499 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 AL590399.2-201ENST00000427536 309 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM38O00635 PTP4A1P3-201ENST00000433661 420 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 MORF4-201ENST00000447135 971 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 RPL5P13-201ENST00000462840 709 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms