Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 AP005403.1-201ENST00000579720 229 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 AC134669.1-201ENST00000581275 672 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.6□□□□□ -1.67
SDCBPO00560 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.6□□□□□ -1.67
SDCBPO00560 AC138965.3-201ENST00000623875 498 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 AC010266.2-201ENST00000564741 3255 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 AL162456.1-201ENST00000634535 2006 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 AC023632.6-201ENST00000624338 2177 ntBASIC4.6□□□□□ -1.67
SDCBPO00560 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.6□□□□□ -1.67
SDCBPO00560 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SDCBPO00560 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.6□□□□□ -1.67
SDCBPO00560 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SDCBPO00560 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 OR9K1P-201ENST00000326513 941 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 AC007618.1-201ENST00000366455 732 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SDCBPO00560 OR2AT2P-201ENST00000413438 905 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC007161.1-204ENST00000423039 460 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC113412.1-201ENST00000425840 504 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC090804.1-201ENST00000448870 490 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AL445665.1-202ENST00000452436 324 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AL358876.1-201ENST00000453364 1075 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 Z83820.1-201ENST00000456978 1499 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC245028.2-201ENST00000458673 253 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.59□□□□□ -1.67
SDCBPO00560 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 AL049874.2-201ENST00000492636 288 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.59□□□□□ -1.67
SDCBPO00560 MORF4L2P1-201ENST00000503761 858 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 MYL12BP2-201ENST00000503948 512 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.59□□□□□ -1.67
SDCBPO00560 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.59□□□□□ -1.67
SDCBPO00560 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.59□□□□□ -1.67
SDCBPO00560 AC098976.1-201ENST00000513014 541 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.59□□□□□ -1.67
SDCBPO00560 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.59□□□□□ -1.67
SDCBPO00560 AC106730.2-201ENST00000566641 540 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.59□□□□□ -1.67
SDCBPO00560 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.59□□□□□ -1.67
SDCBPO00560 PRPF19P1-201ENST00000584766 898 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SDCBPO00560 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 AP000769.2-201ENST00000602344 396 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AL499605.1-201ENST00000604628 403 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AL356608.1-201ENST00000610034 820 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 AL442128.2-201ENST00000620246 1824 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AC005261.6-201ENST00000623072 1387 ntBASIC4.59□□□□□ -1.67
SDCBPO00560 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.59□□□□□ -1.67
SDCBPO00560 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SDCBPO00560 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
SDCBPO00560 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.59□□□□□ -1.68
SDCBPO00560 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.59□□□□□ -1.68
SDCBPO00560 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SDCBPO00560 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 SRRM1P3-201ENST00000426911 2678 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 RNA5SP394-201ENST00000364216 119 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 RNU2-18P-201ENST00000411224 162 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.58□□□□□ -1.68
SDCBPO00560 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.58□□□□□ -1.68
SDCBPO00560 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 TCEA1P3-201ENST00000443005 880 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms