Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AL133268.1-201ENST00000405676 1401 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC005702.3-201ENST00000585345 1447 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01808-203ENST00000641932 1643 ntBASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC2.9□□□□□ -1.94
CHKB-CPT1BH3BT56 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP513-201ENST00000364648 118 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 CDC123-202ENST00000378900 933 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090114.1-201ENST00000393266 448 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OR7E91P-201ENST00000400027 866 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SKP121-201ENST00000410842 305 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 SEPT7P8-201ENST00000413308 775 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OR2AT2P-201ENST00000413438 905 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC013429.2-201ENST00000418798 781 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 SKP1P3-201ENST00000429280 487 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 FABP7P2-201ENST00000429946 379 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS18P1-201ENST00000447840 458 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC104306.1-201ENST00000449702 371 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL10P17-201ENST00000453852 316 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC004129.2-201ENST00000457229 287 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC108751.2-201ENST00000469993 231 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 UBFD1P1-201ENST00000473259 814 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090686.1-201ENST00000481577 749 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RPEP1-201ENST00000504507 658 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP154-201ENST00000516193 111 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC021733.2-201ENST00000518830 497 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 ODF1-202ENST00000518835 368 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 IGHV7-34-1-201ENST00000519200 350 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 IGLVIV-53-201ENST00000520107 367 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OR5AM1P-201ENST00000532136 1032 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC027369.5-201ENST00000533838 755 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 H3F3BP2-201ENST00000583907 357 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090948.2-201ENST00000607363 564 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022106.1-201ENST00000612834 766 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL121873.1-201ENST00000616013 524 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 BX005214.3-202ENST00000619809 325 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AC005753.1-201ENST00000623837 618 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 OXSM-209ENST00000626005 309 ntTSL 3 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 DDX18P5-201ENST00000534547 1306 ntBASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CHKB-CPT1BH3BT56 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 KARSP3-201ENST00000571212 1504 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 MED23-203ENST00000368058 4576 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms