Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 GAPDHP14-201ENST00000450472 937 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AL359839.1-201ENST00000451975 1160 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CTSLP6-201ENST00000458273 1002 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC092754.1-201ENST00000472975 479 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 MORF4L2P1-201ENST00000503761 858 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC122718.2-201ENST00000505325 591 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC100784.1-201ENST00000522790 310 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC026826.3-201ENST00000561747 158 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 MRPS21P7-201ENST00000566937 238 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC097641.3-201ENST00000613523 464 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CXADRP3-202ENST00000617265 1100 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 MIR6839-201ENST00000620425 113 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC129778.1-202ENST00000623812 261 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AP003400.3-201ENST00000624904 346 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AL591379.1-207ENST00000635982 261 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC008691.1-209ENST00000642094 814 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM49D1C9J1S8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 VN1R12P-201ENST00000403778 876 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC124944.2-201ENST00000429866 1242 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC005297.1-201ENST00000444765 862 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AL035090.1-201ENST00000454835 332 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 RN7SL170P-201ENST00000487098 295 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 COX6B1P2-201ENST00000489624 230 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 RPS24P16-201ENST00000497294 392 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 MTND6P2-201ENST00000512226 524 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 MIR4271-201ENST00000582451 67 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC009027.1-201ENST00000604510 479 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 PPATP2-201ENST00000605635 508 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AP005431.1-201ENST00000618479 319 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 AC114786.1-201ENST00000512892 1415 ntBASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM49D1C9J1S8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC004817.4-201ENST00000602396 3625 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC010266.2-201ENST00000564741 3255 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 SMG1P7-201ENST00000565246 2704 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms