Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC021205.1-201ENST00000468797 348 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC093663.2-201ENST00000484625 313 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 MTCYBP19-201ENST00000517463 1124 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 IGHV3-63-201ENST00000518422 341 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 WBP1LP3-201ENST00000523033 208 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AP003396.4-201ENST00000527574 265 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 PCNAP4-201ENST00000532690 730 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC079905.1-201ENST00000549280 475 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL356801.1-201ENST00000559320 294 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 MIR6889-201ENST00000613185 59 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL356094.1-201ENST00000624663 1212 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 OR5AC4P-202ENST00000642086 985 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AP001284.1-201ENST00000528393 2118 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 AC093671.1-201ENST00000624981 2929 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 AL121839.2-201ENST00000565058 6943 ntBASIC4.64□□□□□ -1.67
SRRM4A7MD48 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.64□□□□□ -1.67
SRRM4A7MD48 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRRM4A7MD48 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 MIR133A2-201ENST00000347538 102 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 RNU1-136P-201ENST00000384181 164 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 UBE2V1P15-201ENST00000407776 448 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 RANP4-201ENST00000413361 655 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL158827.1-201ENST00000416300 391 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 BX284632.2-201ENST00000421091 399 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC093716.1-201ENST00000435923 377 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 PA2G4P6-201ENST00000438325 1197 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 EIF5AP4-201ENST00000441206 465 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL512605.1-202ENST00000441919 381 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL359955.2-201ENST00000445380 353 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL157827.1-201ENST00000447622 132 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC118758.1-202ENST00000454719 225 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 HSPE1P22-201ENST00000456856 327 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 RPL5P13-201ENST00000462840 709 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC020779.1-201ENST00000478757 796 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 RN7SL57P-201ENST00000493687 290 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 GAPDHP71-201ENST00000511530 1003 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 SCARNA18.1-201ENST00000516330 83 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC139365.2-201ENST00000517972 253 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 HMGB1P46-201ENST00000520062 610 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 OR8X1P-201ENST00000534542 869 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC006512.2-201ENST00000543250 486 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 CYCSP38-201ENST00000559840 322 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC096996.1-201ENST00000563813 325 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 ZNF322P1-201ENST00000568013 1209 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms