Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 AC012618.2-201ENST00000428058 849 ntBASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 AC017007.3-201ENST00000479865 435 ntBASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 AL157384.1-201ENST00000445995 2473 ntBASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 BX088651.1-201ENST00000540551 451 ntBASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA4Q9Y5G9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 AC233702.5-201ENST00000584107 538 ntBASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 DPP3P2-201ENST00000416030 1696 ntBASIC19.3■□□□□ 0.68
PCDHGA4Q9Y5G9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 KRT18P21-201ENST00000515767 1272 ntBASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 AC138932.1-201ENST00000534164 6830 ntBASIC19.29■□□□□ 0.68
PCDHGA4Q9Y5G9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms