Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT18P22-201ENST00000402024 1347 ntBASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 AC005521.1-201ENST00000393351 872 ntBASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 AP005212.1-201ENST00000581547 1997 ntBASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA9Q9Y5G4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT16P1-201ENST00000399124 1418 ntBASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT8P9-201ENST00000558927 1449 ntBASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA9Q9Y5G4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 KRT8P20-201ENST00000423953 1409 ntBASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGA9Q9Y5G4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 CR392000.1-201ENST00000624770 1228 ntBASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA9Q9Y5G4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 PTBP1P-201ENST00000554374 1601 ntBASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA9Q9Y5G4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms