Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SPG7Q9UQ90 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SPG7Q9UQ90 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SPG7Q9UQ90 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
SPG7Q9UQ90 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 AC116562.4-202ENST00000641738 218 ntBASIC25.7■■□□□ 1.7
SPG7Q9UQ90 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 KRT8P8-201ENST00000434750 1448 ntBASIC25.7■■□□□ 1.7
SPG7Q9UQ90 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SPG7Q9UQ90 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 BX119927.1-201ENST00000636596 1552 ntBASIC25.69■■□□□ 1.7
SPG7Q9UQ90 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 AC091390.4-202ENST00000476426 537 ntBASIC25.69■■□□□ 1.7
SPG7Q9UQ90 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SPG7Q9UQ90 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 AK4P3-201ENST00000418260 669 ntBASIC25.68■■□□□ 1.7
SPG7Q9UQ90 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 CCR12P-201ENST00000446203 998 ntBASIC25.68■■□□□ 1.7
SPG7Q9UQ90 Z85996.1-201ENST00000494644 937 ntBASIC25.68■■□□□ 1.7
SPG7Q9UQ90 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPG7Q9UQ90 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 SLC25A1P2-201ENST00000430693 912 ntBASIC25.67■■□□□ 1.7
SPG7Q9UQ90 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 AL137060.1-201ENST00000618151 2648 ntBASIC25.67■■□□□ 1.7
SPG7Q9UQ90 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.67■■□□□ 1.7
SPG7Q9UQ90 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.66■■□□□ 1.7
SPG7Q9UQ90 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPG7Q9UQ90 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms