Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS29Q9UBQ0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS29Q9UBQ0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS29Q9UBQ0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS29Q9UBQ0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VPS29Q9UBQ0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 AC092368.3-202ENST00000574180 1591 ntBASIC18.81■□□□□ 0.6
VPS29Q9UBQ0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 AL109923.1-201ENST00000618799 583 ntBASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS29Q9UBQ0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AL138781.1-201ENST00000566567 1274 ntBASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 Z82202.1-201ENST00000623446 1880 ntBASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS29Q9UBQ0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 RPS2P52-201ENST00000469610 820 ntBASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS29Q9UBQ0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms