Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 AP000593.1-201ENST00000393668 712 ntBASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 FDX1P1-201ENST00000449115 551 ntBASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 KRT18P16-201ENST00000510337 1294 ntBASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 AC131212.4-201ENST00000623606 975 ntBASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBE2OQ9C0C9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBE2OQ9C0C9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBE2OQ9C0C9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBE2OQ9C0C9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.64■■□□□ 1.06
UBE2OQ9C0C9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 AC004980.1-204ENST00000429707 299 ntBASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBE2OQ9C0C9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 VENTXP5-201ENST00000523979 775 ntBASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AC140113.3-201ENST00000605663 199 ntBASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AP000692.2-201ENST00000608391 879 ntBASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AC023511.2-201ENST00000618803 211 ntBASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 AC010653.2-201ENST00000623505 997 ntBASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
UBE2OQ9C0C9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 HLA-G-202ENST00000376815 851 ntBASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 HLA-G-203ENST00000376818 1127 ntBASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBE2OQ9C0C9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms